PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009615403.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 250aa    MW: 27906.6 Da    PI: 5.0682
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009615403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-171867255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+Wv+e+r p++   r r++lg+++tae+Aa+a + a  +l+g
  XP_009615403.1 18 KYKGVRLRK-WGKWVSEVRLPNS---RERIWLGSYDTAEKAARAFDTAQFCLRG 67
                    8******99.*******999833...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.66E-281877No hitNo description
PfamPF008474.9E-111867IPR001471AP2/ERF domain
PROSITE profilePS5103221.5881875IPR001471AP2/ERF domain
SMARTSM003801.1E-311881IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.1E-291876IPR001471AP2/ERF domain
SuperFamilySSF541714.9E-201876IPR016177DNA-binding domain
PRINTSPR003671.7E-91930IPR001471AP2/ERF domain
PRINTSPR003671.7E-94157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MEGPSQSQNQ NQRNEPIKYK GVRLRKWGKW VSEVRLPNSR ERIWLGSYDT AEKAARAFDT  60
AQFCLRGPNA KFNFPENPPD IPGGQRLSPA EIQVVAAQFA NEYVYPQTAT QETPPSHVQN  120
THVLKMENEE TSQSSTCNHD LMGQMDNTTT ITTAADWSFL DMLENYPNNA AAPPPHISSL  180
PPAAAPPSPA VGTNNFDFGY YPGLETLSSN LYSPLHFPTR TTTGNGDEHV YQDSGNGDEH  240
FSQHSYLWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1515751172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615403.10.0PREDICTED: ethylene-responsive transcription factor ERF018-like
TrEMBLA0A1S4AI921e-165A0A1S4AI92_TOBAC; ethylene-responsive transcription factor ERF018-like
STRINGXP_009615403.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.19e-46ERF family protein