PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009617646.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 221aa MW: 24617.5 Da PI: 5.9568

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009617646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	29.7	1.4e-09	1	20	36	55
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m++kgLtl+h+kSHLQkYRl XP_009617646.1 1 MGLKGLTLYHLKSHLQKYRL 20 899****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.0E-8	1	21	IPR009057	Homeodomain-like
Pfam	PF14379	1.0E-21	66	112	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence Send to blast
MGLKGLTLYH LKSHLQKYRL GQQAKKQNAA EENRENIGES CGQFSLHSSG PSSTSSSMNS 60 MRGEVPISQA LMCQIEVQNR LHEQLEVQQK LQMRIEAQGK YLQAIMDRAH KSLSTDMNSP 120 SSVEATSQLT DFNLALSSLM DCMHGDNRDE TVAGKRTDDD TNKALPTSTY LREEEQKNNV 180 NIKLEEASIS FDLNSRSSYD FIGMNSAALE AKPLSNGRLE I

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009617645.1	1e-162	PREDICTED: myb family transcription factor PHL11-like
Refseq	XP_016440239.1	1e-162	PREDICTED: myb family transcription factor APL-like
TrEMBL	A0A1S3XK76	1e-161	A0A1S3XK76_TOBAC; myb family transcription factor APL-like
STRING	XP_009617645.1	1e-162	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	2e-46	G2-like family protein