PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009617897.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 132aa    MW: 14973.5 Da    PI: 7.9551
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009617897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.000652183955
                    TCHHHHHHHHHHHHHHH CS
             HLH 39 sKaeiLekAveYIksLq 55
                    +Ka+iLe+A+  I++L+
  XP_009617897.1  2 DKASILERATSLIRQLR 18
                    8**************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MDKASILERA TSLIRQLRER PETVLQCHLE TKTNNEKGAP AVKKARISLP EVEVRSLEEE  60
VLITVYCKKK YTGIIDEILS VIQKLHLTIK SSNFMPFGST AMHITVIGQM NDELCETTDC  120
LAEKLRQSIL KM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009617897.18e-93PREDICTED: uncharacterized protein LOC104110157
RefseqXP_016491406.18e-93PREDICTED: uncharacterized protein LOC107811069
TrEMBLA0A1S4BRB02e-91A0A1S4BRB0_TOBAC; uncharacterized protein LOC107811069
STRINGXP_009617897.13e-92(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14501910