PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009618026.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 173aa    MW: 19089.6 Da    PI: 10.0829
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009618026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-203282155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+++GVr ++ +gr++AeIrd ++    + r +lg+f+taeeAa a+++a+++l+g
  XP_009618026.1 32 SHFRGVRKRP-WGRYAAEIRDpWK----KSRRWLGTFDTAEEAALAYDEAARSLRG 82
                    78********.**********883....5999**********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.17E-303289No hitNo description
PfamPF008477.5E-133282IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-223290IPR016177DNA-binding domain
SMARTSM003807.9E-333396IPR001471AP2/ERF domain
PROSITE profilePS5103221.7733390IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-303390IPR001471AP2/ERF domain
PRINTSPR003677.3E-103445IPR001471AP2/ERF domain
PRINTSPR003677.3E-105672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MVALSSTMCG GGGGGGGSQG NTSQTVRTPK ESHFRGVRKR PWGRYAAEIR DPWKKSRRWL  60
GTFDTAEEAA LAYDEAARSL RGPRAKTNFG LAAIDPPPAQ QKLPHWCFNA LSYGSYLEDR  120
SRFGTGETTV ASSEYSGYKL ESIGVVMNEH EKKTKIEKKK PFLFDLNLPA PLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-203091264ATERF1
3gcc_A1e-203091264ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6690780.0AB669078.1 Nicotiana tabacum NtERF#074 gene for ethylene response factor #74, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618026.11e-127PREDICTED: ethylene-responsive transcription factor 4-like
TrEMBLA0A1U7XD614e-88A0A1U7XD61_NICSY; ethylene-responsive transcription factor 9-like
TrEMBLR4WAR64e-88R4WAR6_TOBAC; Ethylene response factor #74
STRINGXP_009618026.11e-126(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA141361212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.16e-23ERF domain protein 12