PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009619193.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 256aa    MW: 29044.7 Da    PI: 4.9804
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009619193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.5e-1966116256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr++  +++Wv+e+r+ps+   +kr++lg++ t+e+Aa+a++ a+++l+g+
  XP_009619193.1  66 IYRGVRRRN-NNKWVCELREPSK---QKRIWLGTYPTPEMAARAHDIAALALRGN 116
                     69****887.8*********964...5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.9E-1365115IPR001471AP2/ERF domain
CDDcd000188.68E-3065125No hitNo description
SuperFamilySSF541713.73E-2166125IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-2866125IPR001471AP2/ERF domain
PROSITE profilePS5103221.87866123IPR001471AP2/ERF domain
SMARTSM003806.2E-2966129IPR001471AP2/ERF domain
PRINTSPR003673.2E-76778IPR001471AP2/ERF domain
PRINTSPR003673.2E-789105IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MTNINSVSCS LDSIPANLER DYSQETSSSS SERLSSSLDE GIILLASSRP KKRAGRKKFK  60
ETRHPIYRGV RRRNNNKWVC ELREPSKQKR IWLGTYPTPE MAARAHDIAA LALRGNSATL  120
NFADSLWRLP VIVSKDPKDL RQAAVKAAEA FRQDPELVGV DYMNEEVNSN DEVKCQENVV  180
NGGGYDMEVK ELKMQNKEME NVLCCDWGEN SDMLEIEGSW QEKMGLLFSP TPRLGNCFSW  240
DDVESDVEVS LWNYSI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009619193.10.0PREDICTED: dehydration-responsive element-binding protein 1E-like
TrEMBLA0A1S3ZYI81e-174A0A1S3ZYI8_TOBAC; dehydration-responsive element-binding protein 1D-like
STRINGXP_009619193.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.12e-45ERF family protein