PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009622476.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 159aa    MW: 18100.4 Da    PI: 6.261
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009622476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.63e-0820541855
             AP2 18 eIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     +rdp+    r  r++lg+f t e A +a+++a+ +++g
  XP_009622476.1 20 TVRDPR----RtGRVWLGTFNTVENATRAYDKAAIEFRG 54
                    567762....359***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.998262IPR001471AP2/ERF domain
SMARTSM003801.9E-72068IPR001471AP2/ERF domain
CDDcd000181.92E-142161No hitNo description
Gene3DG3DSA:3.30.730.102.4E-162162IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-102162IPR016177DNA-binding domain
PfamPF008478.5E-52554IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MVVLGVVQLG LMAGLMVFVT VRDPRRTGRV WLGTFNTVEN ATRAYDKAAI EFRGPRAKFN  60
FSFADYTSIQ QHNTITSISC SKQQQQEPVQ LEQRNKTDAG IGKEEEFWDQ LMKWDNEIQE  120
CLNMKDFNGH SLDSAGNLEG VLLIASDDHF QLNKNWKGK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2740221e-145AB274022.1 Nicotiana tabacum WRAF2 mRNA for wound-responsive AP2 like factor 2, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009622476.11e-117PREDICTED: ethylene-responsive transcription factor ERF109-like
TrEMBLA0A1S3XZ271e-93A0A1S3XZ27_TOBAC; ethylene-responsive transcription factor ERF109-like
STRINGXP_009622476.11e-117(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2405322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.15e-14redox responsive transcription factor 1