PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009627498.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 196aa    MW: 21024.4 Da    PI: 4.7951
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009627498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-182777255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                     y+G+r++k++g+Wv+eIr+p     r   r++lg+f tae+Aa a++ a+ +l+g
  XP_009627498.1 27 IYRGIRRRKSSGKWVSEIREP-----RspNRIWLGTFPTAEMAAIAYDVAAIALKG 77
                    69******************9.....4489**********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.48E-292687No hitNo description
PfamPF008476.8E-122677IPR001471AP2/ERF domain
PROSITE profilePS5103222.2342785IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.1E-282787IPR001471AP2/ERF domain
SMARTSM003804.0E-322791IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-202787IPR016177DNA-binding domain
PRINTSPR003671.9E-52839IPR001471AP2/ERF domain
PRINTSPR003671.9E-55167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MATYGGSSTN IGASNSASNN YSGRHPIYRG IRRRKSSGKW VSEIREPRSP NRIWLGTFPT  60
AEMAAIAYDV AAIALKGPDT DLNFPDSAAS LPVPATSSPR DIQAAAASAA AAVGAAGDAL  120
LARREVHDQK SKSISENLGI GNNYEFMDED LIFDMPNVLV NMAEGMLLSP PRFNLPDDDI  180
AAAAEYTAYQ NLWNYP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009627498.11e-141PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR06e-54ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A1J6KVB51e-119A0A1J6KVB5_NICAT; Ethylene-responsive transcription factor erf024
STRINGXP_009627498.11e-140(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.11e-41ERF family protein