PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009627656.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 258aa    MW: 29783.7 Da    PI: 5.2512
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009627656.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM774.5e-24141346128
             NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                     +F+P+d +l+++ L k v+gk l++ee i  +d+y+ ePw+L   +++ +k  yf ++ +kk++t+ r nr+t +g+W ++ k k++l++ ++  
  XP_009627656.1  14 QFRPSDTDLIMQ-LLKFVAGKCLPTEELIVYADVYSKEPWQLIGDMNS-KKTHYFLTQLKKKKPTDARFNRTTGNGTWTQQNKGKQILDEdDSLI 106
                     7*********77.667899999999999**************866654.577899999*******************************855666 PP

             NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                     +g k++L++   ++ ++ + +W+m ey l
  XP_009627656.1 107 IGYKRSLTYK-HKKDSSLNGRWLMMEYFL 134
                     9*******98.5666669*********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.7989158IPR003441NAC domain
SuperFamilySSF1019414.32E-2414157IPR003441NAC domain
PfamPF023653.9E-1114133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MPQERTKPME KIAQFRPSDT DLIMQLLKFV AGKCLPTEEL IVYADVYSKE PWQLIGDMNS  60
KKTHYFLTQL KKKKPTDARF NRTTGNGTWT QQNKGKQILD EDDSLIIGYK RSLTYKHKKD  120
SSLNGRWLMM EYFLADYLLQ ELKSDEAKEF VICAIKKNPR SEIRGNNAAT VVEYKRFIDR  180
VLQEGVHRQT SGPSEQSTVI LSKNSPLMLV QTDSDGFFGV LNVENQECCY QEGDEEEVDW  240
ESILDFGDHG SVQNDLLY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532640.0EU753264.1 Nicotiana tabacum NAC transcription factor (NAC7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009627656.10.0PREDICTED: NAC domain-containing protein 18-like
RefseqXP_016467346.10.0PREDICTED: NAC domain-containing protein 45-like
TrEMBLA0A1S3ZSF80.0A0A1S3ZSF8_TOBAC; NAC domain-containing protein 45-like
STRINGXP_009627656.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9815725
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.15e-15NAC domain containing protein 41