PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009628610.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 126aa MW: 14532.2 Da PI: 6.5267

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009628610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	33.7	1e-10	10	118	3	109
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekew..yfFskrdkkyatgkrknratksgyWkatgkd 89 GfrF+Ptd+e + +L + v g++++ + + ++vd+y k ePw++ + + + e++ yf +k ++k++ ++ + k + g+ XP_009628610.1 10 EGFRFRPTDSEGL-MFLLRFVVGQEMHDSGFtTTNVDVYgKQEPWEIYdNgvpCGDDEDSTSyrYFITKLKRKNKGTWKQDNKGKPVHYINMGNA 103 6*********99.677777777776665665999999456*****744555222233333236666655554333333334445556666666 PP NAM 90 kevlskkgelvglkktLvfy 109 +v++ +g k+ L + XP_009628610.1 104 SSVVN-----IGSKTNLSYK 118 66665.....5666666554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	10.09	8	126	IPR003441	NAC domain
Pfam	PF02365	3.9E-8	10	118	IPR003441	NAC domain
SuperFamily	SSF101941	8.89E-10	10	117	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence Send to blast
MEQIQQLGQE GFRFRPTDSE GLMFLLRFVV GQEMHDSGFT TTNVDVYGKQ EPWEIYDNGV 60 PCGDDEDSTS YRYFITKLKR KNKGTWKQDN KGKPVHYINM GNASSVVNIG SKTNLSYKNK 120 VFYPED

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009628610.1	4e-91	PREDICTED: uncharacterized protein LOC104118924
TrEMBL	A0A1J6IHC9	1e-76	A0A1J6IHC9_NICAT; Uncharacterized protein
STRING	XP_009628610.1	2e-90	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2219	12	54