PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009628790.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family C2H2
Protein Properties Length: 184aa    MW: 20751.7 Da    PI: 8.6522
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009628790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.1e-057092123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C+k+F++   L +H  +H
  XP_009628790.1 70 FECKTCNKRFPSFQALGNHRASH 92
                    89*****************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.2E-117094IPR007087Zinc finger, C2H2
SMARTSM003550.0227092IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.4297097IPR007087Zinc finger, C2H2
SuperFamilySSF576674.1E-870136No hitNo description
PROSITE patternPS0002807292IPR007087Zinc finger, C2H2
PfamPF139121.8E-5114138IPR007087Zinc finger, C2H2
SMARTSM003557.5114136IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280116136IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MAAANHTYIV CFVRKQCRKE EENSEISGIK RSREEDRQVE AEAMANCALT LLSRLNNNAT  60
STDRDYHNDF ECKTCNKRFP SFQALGNHRA SHKRPKLLAG AGDFLVQSKK NKMHECYICG  120
MEFYLGQALG GHMIRHQKTS SSVARKTKTQ VTGIIFCCLD LNLTPDENVE LKLWPTAPVS  180
SPVL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018634102.11e-118PREDICTED: zinc finger protein ZAT12-like
SwissprotQ9SLD42e-23ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A1S4B2N59e-84A0A1S4B2N5_TOBAC; zinc finger protein ZAT12-like
STRINGXP_009628790.11e-138(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.15e-32C2H2 family protein