PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009628837.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 201aa    MW: 23156.1 Da    PI: 4.2571
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009628837.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM26.32e-08197474128
             NAM  74 knratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     + +++++g+Wk + k  ev+++kg+l+g  k+L +   +++p+ ++ +W+m ey+l
  XP_009628837.1  19 APKTVEKGTWKPQRKGLEVFDAKGRLMGFVKSLKYIpPNKSPNNVNGEWLMTEYSL 74 
                     556789******************************66799999**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.878197IPR003441NAC domain
SuperFamilySSF1019411.57E-121697IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
YFIRIFRKID LVLSVGSYAP KTVEKGTWKP QRKGLEVFDA KGRLMGFVKS LKYIPPNKSP  60
NNVNGEWLMT EYSLYDRYLG AREIKNKGFV VCKIKKKENP DDKKKGKTVV NDEIIRDVEE  120
FINSALQEDN YGMWNDILVA MDDDQKNIEY IEGDELGDQL LALLGSEDNA EYIEWDEVED  180
DQLANLLDSA DDIDLDAIEF I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532590.0EU753259.1 Nicotiana tabacum NAC transcription factor (NAC2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009628837.11e-143PREDICTED: NAC domain-containing protein 53-like, partial
TrEMBLB3VK711e-119B3VK71_TOBAC; NAC transcription factor
STRINGXP_009628837.11e-143(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-06NAC domain containing protein 2