PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009631315.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 232aa    MW: 27166.4 Da    PI: 6.3592
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009631315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.23.9e-2051462128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.........kvkaeekewyfFskrdkkyatgkrknr.atksgyWk 84 
                     + GfrF+Ptd+e +  +L + +++++++ + +  +++d+y   ePw++ +         +++ +++  yf +k +kk  ++ r+n  + ++g Wk
  XP_009631315.1   5 QEGFRFRPTDSERL-MFLLRFIAKQEMNDSGFiTTNIDVYGReEPWEIYNhgvscgnedNADYSSNYRYFITKLKKK--NKARHNLeVGNKGSWK 96 
                     68**********99.7888888888888778735566**97659****74466544332211122233555554444..45677765788***** PP

             NAM  85 atgkdkevlsk.....kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                     ++ k k+v+ k     ++ ++g+kk+L + ++ +  + +  +W+m+ey+l
  XP_009631315.1  97 QQDKGKSVHYKntgnsSSVVIGCKKSLCYVNKdQCYNQNDGHWLMKEYEL 146
                     ********999776655566**********66255677799*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-194169IPR003441NAC domain
PROSITE profilePS5100523.1254169IPR003441NAC domain
PfamPF023657.4E-146146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MEQLQEGFRF RPTDSERLMF LLRFIAKQEM NDSGFITTNI DVYGREEPWE IYNHGVSCGN  60
EDNADYSSNY RYFITKLKKK NKARHNLEVG NKGSWKQQDK GKSVHYKNTG NSSSVVIGCK  120
KSLCYVNKDQ CYNQNDGHWL MKEYELSNVI LQKFDEDCRD YVLCAIKRKS CSTDYIERPL  180
ARVQYQVNDL GNYMQSNSGH YVESETDMTT QNEVPELEVL DYQLEVLGMK RT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009631313.11e-175PREDICTED: NAC domain-containing protein 78-like
RefseqXP_018622015.11e-175PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1S4AGN11e-158A0A1S4AGN1_TOBAC; NAC domain-containing protein 78-like
STRINGXP_009631312.11e-175(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.14e-13NAC domain containing protein 32