PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009757158.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 239aa MW: 27403.3 Da PI: 9.3586

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009757158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	140.9	7.7e-44	9	135	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt eel+++yLk ++g+kl+ +vi+ v+iy ++Pw+Lp ++ +e+ewyfF++ ++k+ + ++nr+t++g+Wkatg+d ++ s+ XP_009757158.1 9 PGFRFHPTAEELINFYLKSIIKGNKLDS-NVIAFVNIYLHDPWELPGLARIGEREWYFFVPINRKHGPKGKPNRTTRNGFWKATGSDCQIRSTld 102 9***********************99.99***********8778899**********************************9988 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++glkktLvfy grapkg +tdWvm+eyrl XP_009757158.1 103 PRKVIGLKKTLVFYGGRAPKGCRTDWVMNEYRL 135 8889*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	49.916	7	155	IPR003441	NAC domain
SuperFamily	SSF101941	9.81E-52	8	155	IPR003441	NAC domain
Pfam	PF02365	1.1E-23	9	135	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence Send to blast
MSLPELELPG FRFHPTAEEL INFYLKSIIK GNKLDSNVIA FVNIYLHDPW ELPGLARIGE 60 REWYFFVPIN RKHGPKGKPN RTTRNGFWKA TGSDCQIRST LDPRKVIGLK KTLVFYGGRA 120 PKGCRTDWVM NEYRLPDGHP LPKDHDIVLC KVYRKATSFK VLEQRAIVEE HAAKRPPTSH 180 DNLGPLVPQE DLESSASHNF RSFQEENHNT TIKLPQLSSP LWTELQSTGQ DLWSLFSLS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	5e-41	5	160	12	173	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975441	2e-77	HG975441.1 Solanum pennellii chromosome ch02, complete genome.
GenBank	HG975514	2e-77	HG975514.1 Solanum lycopersicum chromosome ch02, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009757158.1	1e-179	PREDICTED: putative NAC domain-containing protein 94
Swissprot	Q10S65	3e-76	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A1U7USG2	1e-178	A0A1U7USG2_NICSY; putative NAC domain-containing protein 94
STRING	XP_009757158.1	1e-179	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3531	22	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-84	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]