PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009758579.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 155aa    MW: 17129.9 Da    PI: 7.3844
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009758579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.33.7e-19126154230
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa 30 
                     +DgynWrKYGqK+vkgse+prsYY+Ct++
  XP_009758579.1 126 EDGYNWRKYGQKQVKGSENPRSYYKCTHP 154
                     8**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-16122154IPR003657WRKY domain
SuperFamilySSF1182901.11E-14124154IPR003657WRKY domain
SMARTSM007746.8E-8125155IPR003657WRKY domain
PROSITE profilePS5081115.686126155IPR003657WRKY domain
PfamPF031061.1E-13126153IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MVNASNWNLE EELKLLSTGV TAPARLGPQV QSHKRGNGLA GQGPQMRSDS LQLRGRTCRR  60
SDRKCGYAGD CFAEKDVRDS NVTPDSINFQ TVGSIVEHSP PLDEPQDEEI DQRVGGDPNV  120
VGAPAEDGYN WRKYGQKQVK GSENPRSYYK CTHPK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0635761e-105AB063576.1 Nicotiana tabacum NtWRKY-9 mRNA for WRKY DNA-binding protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009758579.11e-113PREDICTED: probable WRKY transcription factor 2
TrEMBLA0A1U7V8J91e-112A0A1U7V8J9_NICSY; probable WRKY transcription factor 2
STRINGXP_009758579.11e-113(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2322222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26440.19e-18WRKY DNA-binding protein 34