PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009761459.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 134aa MW: 14503.3 Da PI: 9.9143

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009761459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	35.2	2.5e-11	33	58	37	62
zf-Dof 37 rryWtkGGalrnvPvGggrrknkkss 62 ryWtkGG+lrn+ vGgg+r+n +ss XP_009761459.1 33 LRYWTKGGTLRNISVGGGSRNNTTSS 58 6********************98775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.8E-6	34	55	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 134 aa Download sequence Send to blast
MTKRFFEVMY NLTQKSFFAE VAPLHGLRPD SALRYWTKGG TLRNISVGGG SRNNTTSSNK 60 KISSSTTLSS VSSSKPDQIT NPKPEPFGIP AIPAFDQNCC RAIGMTNGQF SSLLESSGPQ 120 LTTTSSTKEN AYDL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009761459.1	3e-95	PREDICTED: dof zinc finger protein DOF3.1-like
TrEMBL	A0A1U7VGJ7	6e-94	A0A1U7VGJ7_NICSY; dof zinc finger protein DOF3.1-like
STRING	XP_009761459.1	1e-94	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419