PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009766553.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 181aa    MW: 21228.8 Da    PI: 7.8544
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009766553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.36.6e-19101475128
             NAM   5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.........kvkaeekew.yfFskrdkkyatgkrknr.atksgyWkat 86 
                     +rF+Ptd+e + + L + +++++++ + +  +++d+y   ePw++ +           +a+++++ yf +k +kk++     nr + ++g Wk++
  XP_009766553.1  10 YRFRPTDSERL-KLLLRYIAKQEMNDSGFiTTNIDVYGGeEPWEIYNhgvpcgnddD-NADSSNYrYFITKLKKKSKA--GYNReVGNKGSWKQQ 100
                     49********9.7788888888877777735566**98659****744677665431.22223332666665555543..445547889****** PP

             NAM  87 gkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k k+v+ +     +  ++g+kk+L + +++  + +  +W+m+ey+l
  XP_009766553.1 101 DKAKSVHYEnvgnsSLVVIGCKKSLCYVNKEYYNQNDGHWLMKEYEL 147
                     ******998665433444************999*9**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.1736170IPR003441NAC domain
PfamPF023651.1E-1210147IPR003441NAC domain
SuperFamilySSF1019412.35E-1710168IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MEQQLQEGFY RFRPTDSERL KLLLRYIAKQ EMNDSGFITT NIDVYGGEEP WEIYNHGVPC  60
GNDDDNADSS NYRYFITKLK KKSKAGYNRE VGNKGSWKQQ DKAKSVHYEN VGNSSLVVIG  120
CKKSLCYVNK EYYNQNDGHW LMKEYELSSV ILQKFDEDRR DYVLCAIKRM PHSTDYARCL  180
N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009766553.11e-135PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1U7VJP91e-133A0A1U7VJP9_NICSY; NAC domain-containing protein 78-like
STRINGXP_009766553.11e-134(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-09NAC domain containing protein 2