PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009769005.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 227aa MW: 26342.4 Da PI: 9.6636

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009769005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.6	2.6e-28	31	151	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 GfrFhPtd elv +yL + v + +l++ i e d+y+ ePw k + +e+ +yfF++ +kk+ +++r r++ +g Wk++ k k+v+s+kg XP_009769005.1 31 EGFRFHPTDAELV-KYLLQYVLKGRLPELVPIVEEDLYSKEPWVVFK--DRKERTLYFFTELKKKKIENSRFIRSVGKGSWKSQDKGKPVCSEKG 122 7**********.89999999999888777*********962..3467899*********************************** PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g k++L + + +p+ +W+m+ey+l XP_009769005.1 123 SVMGYKRSLRYQNLGSPQ--DGQWLMKEYSL 151 *******9655555..89*****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	31.155	29	179	IPR003441	NAC domain
SuperFamily	SSF101941	2.75E-28	30	179	IPR003441	NAC domain
Pfam	PF02365	1.6E-17	31	151	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence Send to blast
MSQLACTSQI IMHNIKNEEK ELCIENSANT EGFRFHPTDA ELVKYLLQYV LKGRLPELVP 60 IVEEDLYSKE PWVVFKDRKE RTLYFFTELK KKKIENSRFI RSVGKGSWKS QDKGKPVCSE 120 KGSVMGYKRS LRYQNLGSPQ DGQWLMKEYS LADEVKKILH QRSRGYDKDN YVVCRVKRKV 180 AKDDPIARKE SIEAAELEAI INPTDGSTKF PNLSIDDVAK LKIMRMQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	3e-19	12	179	3	168	Stress-induced transcription factor NAC1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009769005.1	1e-169	PREDICTED: NAC domain-containing protein 68-like
Refseq	XP_016441925.1	1e-169	PREDICTED: NAC domain-containing protein 68-like
TrEMBL	A0A1S3XPQ2	1e-167	A0A1S3XPQ2_TOBAC; NAC domain-containing protein 68-like
TrEMBL	A0A1U7W415	1e-167	A0A1U7W415_NICSY; NAC domain-containing protein 68-like
STRING	XP_009769005.1	1e-168	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1024	13	85

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46590.1	7e-21	NAC domain containing protein 96