PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009774958.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 368aa    MW: 41708.3 Da    PI: 4.457
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009774958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.61e-1881473128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknr.atksgyWkatgkd 89 
                      GfrF+Ptd+e +  +L + v+g++++ + +  ++vd+y k ePw++  +   + + e+++ y +F+++ kk++ + r +r + ++g+Wk+  k 
  XP_009774958.1   8 EGFRFRPTDSEGL-TFLLRFVAGQEMHDSGFiTTNVDVYgKQEPWEIYdSgvpCGDDEDNSSYrYFITKLKKKS-NARYHRsVGNKGTWKQDNKG 100
                     7**********99.8999999999988878835667*99456*****733555333345544424444444444.5677775888********** PP

             NAM  90 kevlsk......kgel..vglkktLvfykg..rapkgektdWvmheyrl 128
                     k+v+ k      +  +  +g k++L + ++    ++ +  +W+m+ey+l
  XP_009774958.1 101 KPVHYKnmgnssS--VvnIGSKTSLSYKNKkfYPEDQKDGHWLMKEYEL 147
                     ****996655433..156*********95522455566789******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.01E-165168IPR003441NAC domain
PROSITE profilePS5100522.6936170IPR003441NAC domain
PfamPF023651.5E-128147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MEHLKFEEGF RFRPTDSEGL TFLLRFVAGQ EMHDSGFITT NVDVYGKQEP WEIYDSGVPC  60
GDDEDNSSYR YFITKLKKKS NARYHRSVGN KGTWKQDNKG KPVHYKNMGN SSSVVNIGSK  120
TSLSYKNKKF YPEDQKDGHW LMKEYELSKV ILHKFDQDRR DYVLCAIKKL KHVNSSSETS  180
TITTLNNVSE GTDEVTSSVD DLLATNNCKG YYNLEHSETL AFQESMVMNN SVFEPLQVVA  240
EPAEFPDYLY QWDGPELNQI LDGVPEVDVA VDIVEPLPAA AEPTEATYTY GQHSVEATAR  300
YDPSMPDMSI NSAHIEHSKV ANMSQMNLMS FDQSVPEDVL GLDPWDIMDS NELNRMLEDV  360
SECCPDGC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774958.10.0PREDICTED: protein ATAF2-like
TrEMBLA0A1U7W8K20.0A0A1U7W8K2_NICSY; protein ATAF2-like
STRINGXP_009774958.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-11NAC domain containing protein 32