PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009776071.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 368aa    MW: 41645.1 Da    PI: 8.9651
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009776071.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.13.9e-082412801756
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++ 
  XP_009776071.1 241 AQRSRVRKLQYIAELERNVQVLQAESSEVSAELEFLNQQN 280
                     89********************************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0019230289IPR004827Basic-leucine zipper domain
CDDcd147034.91E-16232280No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-5241284No hitNo description
SuperFamilySSF579593.94E-6241283No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MANTKGPSNM RSMMYNGKCS LLPPKSPFPS MAPSYLDYVP SSAVNQKGIL KPRDGNSHHQ  60
RTSSESCLIE EQPSWLDDLL NEPETPVRRG SHRRSSSDSF AYFDAANVAG LDYIAQVDNK  120
FGNMTRIPSW GSQDFDYYKD ARDAVSYVDQ NSSVQRKNKT KDASSNTVLH LRNLSSPRED  180
LRIQSSGSPC LPQDGDRPKS AGSDKQDLAE SGKGSAEKKD SFQSKSSSSE TDTKRAKQQF  240
AQRSRVRKLQ YIAELERNVQ VLQAESSEVS AELEFLNQQN LILSMENKAL KQRLENLAQE  300
QLIKYLEHEV LERERGRLRG LYQQQQQPQQ LSSSHRRNTS RDLDQQFANL SLRQKEADRD  360
PVSGQLHI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0133190.0BT013319.1 Lycopersicon esculentum clone 135006R, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009776071.10.0PREDICTED: uncharacterized protein At4g06598
TrEMBLA0A1U7WFP50.0A0A1U7WFP5_NICSY; uncharacterized protein At4g06598
STRINGXP_009776071.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27651733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.24e-78bZIP family protein