PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009779504.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 142aa MW: 16102.3 Da PI: 9.3482

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009779504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41	4.2e-13	25	74	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 k+ +r+++NRe+ArrsR +K+ ++eL+++v +L+a N++ ++ee ++ XP_009779504.1 25 KKRKRMISNRESARRSRMKKQNLVQELTKEVSKLQAANRTIVAKIEETTE 74 899************************************99999998776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-14	21	85	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.335	23	76	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	8.4E-11	23	75	No hit	No description
Pfam	PF00170	1.2E-10	25	74	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.38E-11	25	77	No hit	No description
CDD	cd14702	8.86E-14	26	76	No hit	No description
PROSITE pattern	PS00036	0	28	43	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence Send to blast
MSALRQSGSS SASEGDQRYA CMDEKKRKRM ISNRESARRS RMKKQNLVQE LTKEVSKLQA 60 ANRTIVAKIE ETTERLTFCT AQNNVLRAQE IELTDWLKSL NDLINHSGLV TDVTNVADCL 120 LKPWQITCSM QQISASSGLF QY

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009779504.1	1e-101	PREDICTED: ocs element-binding factor 1-like
TrEMBL	A0A1U7WXW1	1e-100	A0A1U7WXW1_NICSY; ocs element-binding factor 1-like
STRING	XP_009779504.1	1e-101	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11126	15	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G62420.1	2e-33	basic region/leucine zipper motif 53