PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009780019.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 252aa    MW: 27974.5 Da    PI: 5.0731
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009780019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.5e-182069255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+Wv+e+r p++   r r++lg+++tae+Aa+a +aa  +l+g
  XP_009780019.1 20 KYKGVRLRK-WGKWVSEVRLPNS---RERIWLGSYDTAEKAARAFDAAQFCLRG 69
                    8******99.*******999833...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.57E-292079No hitNo description
SuperFamilySSF541713.2E-202078IPR016177DNA-binding domain
SMARTSM003809.4E-322083IPR001471AP2/ERF domain
PROSITE profilePS5103221.6282077IPR001471AP2/ERF domain
PfamPF008478.0E-122069IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-292078IPR001471AP2/ERF domain
PRINTSPR003671.7E-92132IPR001471AP2/ERF domain
PRINTSPR003671.7E-94359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0002213Biological Processdefense response to insect
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009611Biological Processresponse to wounding
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MEGQGQSQSQ NQNQRNEPIK YKGVRLRKWG KWVSEVRLPN SRERIWLGSY DTAEKAARAF  60
DAAQFCLRGP NAKFNFPENP PDISGGQRLS PAEIQVVAAQ FANEYVYPQT TTQETPPSHV  120
QNTHVLKMEN EETSQSSTCD HDLIGHMGNT TTVDWSFLDM LENYPNNAAA AAAAPPPHIS  180
SLPPAAAPPS PAIGTNNFDF GYYPGLDTLS SNLYSPLHFP TRTTNSNGDE HGYEDSGNGD  240
EHFSQHSYLW NF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1420771472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00601PBMTransfer from AT1G74930Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009780019.10.0PREDICTED: ethylene-responsive transcription factor ERF017-like
RefseqXP_016469567.10.0PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLA0A1S3ZYQ90.0A0A1S3ZYQ9_TOBAC; ethylene-responsive transcription factor ERF017-like
TrEMBLA0A1U7WZG80.0A0A1U7WZG8_NICSY; ethylene-responsive transcription factor ERF017-like
STRINGXP_009780019.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.12e-45ERF family protein