PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009788577.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family EIL
Protein Properties Length: 661aa    MW: 74416.5 Da    PI: 6.3398
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009788577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3431.86.5e-132403991348
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     eel++rmwkd+++lkrlker+k    +++ a++++k++++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWW
  XP_009788577.1  40 EELERRMWKDRVKLKRLKERQKLA--AQQ-AADKQKNKQTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWW 131
                     8*******************9963..355.59*************************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fd+ngpaai+ky+a++ + +++ ++  ++ + ++ l++lqD+tlgSLLs+lmqhcdppqr+fplekgv+pPWWPtG+e+ww+++gl+k q
  XP_009788577.1 132 KEKVKFDKNGPAAIAKYEAECRAKGEGVGN--QNGNPQSVLQDLQDATLGSLLSSLMQHCDPPQRKFPLEKGVSPPWWPTGNEEWWAKMGLPKGQ 224
                     **********************99988888..57999999******************************************************* PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.......XXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.......slrkqspkvtl 276
                     + ppykkphdlkk++kv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes ++l+vl++ee+ +++ s++  ss        +r +++k  +
  XP_009788577.1 225 K-PPYKKPHDLKKMYKVGVLTAVIKHMSPDIAKIRRLVRQSKCLQDKMTAKESSIWLAVLSREESTIQQPSSDngSSsiseapnRIRGEKKKPSV 318
                     *.9*********************************************************************97633577777777779999999 PP

                     XXXXXXXXXXXXXXX.XXXXXXXXXX............XXXXXXXXX.XXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXX CS
            EIN3 277 sceqkedvegkkeskikhvqavktta............gfpvvrkrk.kkpsesakvsskevsrtcqssqfrgsetelifadkns 348
                     ++e+++dv+g ++ + + ++ +++ +            +++ + +r+ +k+++s+     + +++  ++q ++ e +++++d n+
  XP_009788577.1 319 DSESDYDVDGVNDGNDSVSSRDERGNepsnarpqshqgKEQGNGQRRkRKRARSN---P-QQTQLSLNNQQPDDEARNTLPDINN 399
                     *********5555553444444443355566666665533333333302222222...2.2357889999999999999999776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.9E-12540287No hitNo description
Gene3DG3DSA:1.10.3180.102.7E-70164295IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.31E-60168290IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 661 aa     Download sequence    Send to blast
MEYCMIDADG LGNSSDIEVD DIRCDNIEEK DVSDEEIDPE ELERRMWKDR VKLKRLKERQ  60
KLAAQQAADK QKNKQTTDQA RRKKMSRAQD GILKYMLKLM EVCKARGFVY GIIPEKGKPV  120
SGASDNIRAW WKEKVKFDKN GPAAIAKYEA ECRAKGEGVG NQNGNPQSVL QDLQDATLGS  180
LLSSLMQHCD PPQRKFPLEK GVSPPWWPTG NEEWWAKMGL PKGQKPPYKK PHDLKKMYKV  240
GVLTAVIKHM SPDIAKIRRL VRQSKCLQDK MTAKESSIWL AVLSREESTI QQPSSDNGSS  300
SISEAPNRIR GEKKKPSVDS ESDYDVDGVN DGNDSVSSRD ERGNEPSNAR PQSHQGKEQG  360
NGQRRKRKRA RSNPQQTQLS LNNQQPDDEA RNTLPDINNS NVLFAGHITN ESQPEKDQPE  420
LQLRDSNLSV VPSTNAVSTE DAFIGNGPSI NPVLENSEVV PYESRFHLGT QDSVVQHQLH  480
DTQLQSRTQF SGMNNEPRSS IFHYVPPNNG LHNGPENSVI HHELQDPGFA HGSQYPNLHQ  540
PHIYQYYTPS AEFVSAHDEQ QSHLAFNEPQ IKTKDSGVRS SVLHGSRNDI AREDHHYGKD  600
TFQHDHDRPV EMHFASPVAG GSPDYARLSS PFNFDLDVPS TLDTGDFELF LDEDVMTFFA  660
S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A7e-731672989140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1363368RRKRKR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754400.0HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009788577.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1
RefseqXP_016465525.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-179EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1S3ZLW20.0A0A1S3ZLW2_TOBAC; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1U7X8Z30.0A0A1U7X8Z3_NICSY; ETHYLENE INSENSITIVE 3-like 3 protein isoform X1
STRINGXP_009788577.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-166ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]