PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009795944.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 255aa    MW: 29498.2 Da    PI: 5.9946
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009795944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.56.6e-2071472128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkd 89 
                       GfrF+Ptd+e +  +L + v+g++++ + +  +++d+y k ePw++  +   + + e+++ y ++ ++ k++++ r +r + ++g+Wk+  kd
  XP_009795944.1   7 EEGFRFRPTDSEGL-TFLLRFVAGQEMHDAGFiTTNIDVYgKQEPWEIYdNgvpCGDDEDNSSYCYFITKLKKKSNARYHRsVRNKGTWKQDAKD 100
                     68**********99.8899999999988878735566*99456*****7445553334555555444444444456777775778********** PP

             NAM  90 kevlsk......kgelvglkktLvfykg..rapkgektdWvmheyrl 128
                     k+v+ k      +  ++g k+ L + ++    ++ +  +W+m+ey+l
  XP_009795944.1 101 KPVHYKtmgntsSVVNIGSKTCLSYKNKmfYPEDQRDGHWLMKEYEL 147
                     ****99776544334499*****9995543455666789******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.09E-174168IPR003441NAC domain
PROSITE profilePS5100522.3876170IPR003441NAC domain
PfamPF023655.6E-138147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MEHLKLEEGF RFRPTDSEGL TFLLRFVAGQ EMHDAGFITT NIDVYGKQEP WEIYDNGVPC  60
GDDEDNSSYC YFITKLKKKS NARYHRSVRN KGTWKQDAKD KPVHYKTMGN TSSVVNIGSK  120
TCLSYKNKMF YPEDQRDGHW LMKEYELSKV ILHKLDEDRR DYVLCAIKKL KHVNSSSETS  180
TTTMLNFDQS VLPDMYSNSA HVVYSEVADH MTYMSQINSK KVPEDVLGLD LWDIMNSDEL  240
HRILEDVSEC CPNGC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009795944.10.0PREDICTED: protein ATAF2-like
TrEMBLA0A1U7Y9M10.0A0A1U7Y9M1_NICSY; protein ATAF2-like
STRINGXP_009795944.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.18e-12NAC domain containing protein 2