PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009795965.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 179aa MW: 20448.1 Da PI: 8.2106

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009795965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	126.8	2.6e-39	34	124	3	93
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspess 93 + r p+ +Er +nk+RE +RRa+a ki+aGLRa+Gnyklpk+aD n+ lkALc eAGw e+DGt yrk ++p + + + sa+++ + XP_009795965.1 34 KFRYPSDRERQKNKQREQKRRAVAHKIFAGLRAHGNYKLPKHADTNDLLKALCDEAGWHFEEDGTIYRKEKNPVKDMPRLVDVDSAQISME 124 5699*********************************************************************966655544444333333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.5E-36	35	128	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence Send to blast
MVEERRSVLR GCIKTSRGPW LVHKTTKNGS VVTKFRYPSD RERQKNKQRE QKRRAVAHKI 60 FAGLRAHGNY KLPKHADTND LLKALCDEAG WHFEEDGTIY RKEKNPVKDM PRLVDVDSAQ 120 ISMEDQIKDS DYFKCEDQIK DGDYCKCDVD MNVAEIELGG SLTPSADAFN VNLNLSLSS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	6e-16	36	107	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	6e-16	36	107	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	6e-16	36	107	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	6e-16	36	107	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009795965.1	1e-133	PREDICTED: uncharacterized protein LOC104242587
Swissprot	Q9S7F3	6e-19	BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBL	A0A1U7YAZ7	1e-132	A0A1U7YAZ7_NICSY; uncharacterized protein LOC104242587
STRING	XP_009795965.1	1e-133	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6204	21	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50750.1	1e-20	BES1/BZR1 homolog 1