PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009797386.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 182aa MW: 20736.3 Da PI: 7.805

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009797386.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	127.8	1.3e-39	35	114	4	83
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaag 83 r p+ +Er +nk+RE +RRa+a ki+aGLRa+Gny+lpk+aD n+ lkALc eAGw ve+DGt yrk ++p + + XP_009797386.1 35 FRYPSDRERQKNKQREQKRRAVAHKIFAGLRAHGNYELPKHADTNDLLKALCDEAGWRVEEDGTIYRKEKNPVKDMPGLI 114 5899*******************************************************************995554433 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	6.4E-36	36	108	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence Send to blast
MVTERRSVLR GCIKTSRGPW LVHKTTKDGS VVTRFRYPSD RERQKNKQRE QKRRAVAHKI 60 FAGLRAHGNY ELPKHADTND LLKALCDEAG WRVEEDGTIY RKEKNPVKDM PGLIDVDSAQ 120 VYVEDKIKDS DYCKCEDQIK DGDYCKCDID MNVAETETAR PEGSVTPSAE VFNVNLNLSL 180 SS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-16	36	114	372	447	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-16	36	114	372	447	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-16	36	114	372	447	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-16	36	114	372	447	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009797386.1	1e-135	PREDICTED: protein BRASSINAZOLE-RESISTANT 2-like
TrEMBL	A0A1U7Y5Z4	1e-133	A0A1U7Y5Z4_NICSY; protein BRASSINAZOLE-RESISTANT 2-like
STRING	XP_009797386.1	1e-134	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6204	21	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.6	3e-21	BES1 family protein