PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009799422.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 144aa    MW: 16728.3 Da    PI: 9.6072
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009799422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.51.1e-18511021128
             NAM  21 kkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrap 114
                     k v+gk l++e  i+ +d+y+ ePw+L    ++++k  yf ++ +kk++ + r nr+t +g+W ++ k ke++++ ++  +g k++L +  +++ 
  XP_009799422.1   5 KFVAGKCLPTEGLIDFADVYSKEPWQLI--GDSSKKTHYFLTQLKKKKPIDARFNRTTGNGTWTQQNKGKEIFDEdESLIIGYKRSLSYK-NKKD 96 
                     5677788888888999***********7..3446677899999999999*************************8455569*******97.6777 PP

             NAM 115 kgektdWvmheyrl 128
                     +  + +W+m ey l
  XP_009799422.1  97 SFLNGRWLMMEYFL 110
                     779*********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.5151131IPR003441NAC domain
SuperFamilySSF1019411.02E-165112IPR003441NAC domain
PfamPF023655.7E-827109IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MQLLKFVAGK CLPTEGLIDF ADVYSKEPWQ LIGDSSKKTH YFLTQLKKKK PIDARFNRTT  60
GNGTWTQQNK GKEIFDEDES LIIGYKRSLS YKNKKDSFLN GRWLMMEYFL ADFVLRELKS  120
KEVIWCPSHS NELATLSGFC LQKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532631e-149EU753263.1 Nicotiana tabacum NAC transcription factor (NAC6) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009799422.11e-104PREDICTED: uncharacterized protein LOC104245505
TrEMBLA0A1U7Y5M21e-103A0A1U7Y5M2_NICSY; uncharacterized protein LOC104245505
STRINGXP_009799422.11e-103(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9815725
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.18e-12NAC family protein