PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010086541.1
Common NameDREB4G
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 261aa    MW: 27700.5 Da    PI: 4.679
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010086541.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.91.4e-1485133255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++G+r ++ +g+Wv+eIr+p++   ++r++lg+f  +e+Aa+a++ a+++l+g
  XP_010086541.1  85 RFRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPAPEMAAAAYDVAALALKG 133
                     689**9.55.6*********843...5************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.86E-1684143No hitNo description
PROSITE profilePS5103219.58585141IPR001471AP2/ERF domain
PfamPF008476.6E-885133IPR001471AP2/ERF domain
SMARTSM003801.8E-2985147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-2585142IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-1786143IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MADQNNPNTT DQSPNLDCPP NSSSSSSSSS SSLSLPIQPL RQHCSLPLVP TCESTTTTAP  60
YSSTQPNSTS NIMASTSSGS NHPARFRGIR CRSGKWVSEI REPRKTTRIW LGTFPAPEMA  120
AAAYDVAALA LKGSDAVLNF PTSVGDYPVP ASTSPGDIRS AATAAAASKR AELERRKAAR  180
EAMTASFHGD SSSTTTAELT TSYDHGEYVD EEALFGMPNL LVEMAEGMLL SPPRMMESPP  240
PSDEYYSPGS SDGGDSLWGY F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1279141972Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010086541.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783740.0KF678374.1 Morus notabilis dehydration responsive element binding transcription factor (DREB4G) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010086541.10.0ethylene-responsive transcription factor ERF027
SwissprotQ9FJ906e-45ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLW6FIY40.0W6FIY4_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010086541.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.17e-27ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]