PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010086659.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 854aa    MW: 90868.2 Da    PI: 4.7761
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010086659.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-08200244144
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 
                      r++W++ Ed+ l+ av++ G g+W+ I r      Rt+ q+  rw
   XP_010086659.1 200 RKPWSEAEDLELIAAVQKCGEGNWANILRGDFkGDRTASQLSQRW 244
                      789************************984223588888888888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.476195252IPR017930Myb domain
SuperFamilySSF466892.3E-11197249IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.5E-12197249IPR009057Homeodomain-like
SMARTSM007177.2E-9199250IPR001005SANT/Myb domain
PfamPF002491.1E-6200244IPR001005SANT/Myb domain
CDDcd116603.03E-13201249No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 854 aa     Download sequence    Send to blast
MIEKASKKQK KGSVSEEDVV SLLQRYTATT VLTLLNEVAN CTDVKIDWNV LVEKSSTGIS  60
NASEYQMLWR HLAYRHSFLE KFEDGAQPLD DDSDLEYELE ASPVVNNETS NEAAACVKVL  120
IASGLPSDTN PSGSTIEAPL TINIPNGQPS GALEQPSCST QGTNIIVPVS VQKQPAPAVT  180
VVEPLDTNGS ASGNLLKRKR KPWSEAEDLE LIAAVQKCGE GNWANILRGD FKGDRTASQL  240
SQRWAIIRKR HGNLNLGSSS NGTQLSEAQL AARHAMSLAL NMPVKNLTAN TISHAGTTAL  300
NNSMGTNSTN KSAGTNAAAG GNSSLQLQNQ SQENLASKES PVGSLGPITK ARIPMKKPLV  360
KSTPSSDAMV RATAVAAGAR IASPSDAASL LKAAQAKNAI HIRPTGSGSI KSSMPGGLPA  420
PSEAHPNVHY IRTGLASAPV SNYAAATPSV PCPASVKSIS SPVQQTPTSN GTSLDVSSKQ  480
KNYVSCTPAH ELPLKQEAKT VEEIKVPASG SAAKQQIQGD GACVSANSQD GLVQDNKVAA  540
PDPDAELKGT SDVGKPVSTL NERTAENDRL IVDIKFKDRE SEKGNEIISS LVGAGENSEH  600
QNIYKMQEDH AVGENVEPQN IDKMQDLAVG ENGEPHKIDK MQEDHAVGII SSLVGAGENS  660
EHQNIDKMQE DHAVGENGEP RNIDKMQEDL AVGENGEPHK IDKMQEDHAV GKNGEAPNTD  720
KMQEDCAVGK NGEAPNTDKM QDDHTSEKNG EHQNIDKMQD EHTAEKNGEP QNIDKDLAVG  780
KSGEPQNIEK MQEDHAVGND GEAQNTNKVQ EDHAVEENVE AQNIDKMQED LPSTTADGSS  840
RKSENSCKEA SNEI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195201LKRKRKP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010086659.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010086659.10.0uncharacterized protein LOC21386454 isoform X2
TrEMBLW9QIL60.0W9QIL6_9ROSA; Uncharacterized protein
STRINGXP_010086659.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.14e-76MYB_related family protein