PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010086980.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

WRKY

Protein Properties

Length: 186aa MW: 21686.3 Da PI: 9.7654

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010086980.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.2	1.2e-31	109	167	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s+fprsYY+Ct++gC+vkk+++r +d+ +v++tYeg H+h+ XP_010086980.1 109 LDDGYRWRKYGQKTVKNSKFPRSYYKCTYQGCNVKKQIQRHCKDEGIVVTTYEGMHTHP 167 59********************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.0E-32	94	167	IPR003657	WRKY domain
SuperFamily	SSF118290	8.76E-29	101	168	IPR003657	WRKY domain
PROSITE profile	PS50811	29.023	104	169	IPR003657	WRKY domain
SMART	SM00774	1.2E-36	109	168	IPR003657	WRKY domain
Pfam	PF03106	1.8E-25	110	167	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence Send to blast
MIFLNSPPTS KAPEHVSKYN ASDLWAHFHG IDNSVEYHDR EVKETVNKFD GHIMEAYHNK 60 SGHIGGDHES GPSYNCSEKN KKKPGKRQGE KVTRRHKFAF QTRSQVDVLD DGYRWRKYGQ 120 KTVKNSKFPR SYYKCTYQGC NVKKQIQRHC KDEGIVVTTY EGMHTHPLER SVENFDQILK 180 GMRTSY

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wj2_A	3e-26	99	168	7	76	Probable WRKY transcription factor 4
2lex_A	3e-26	99	168	7	76	Probable WRKY transcription factor 4
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010086980.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010086980.2	1e-140	probable WRKY transcription factor 75
TrEMBL	W9QX94	1e-138	W9QX94_9ROSA; Putative WRKY transcription factor 75
STRING	XP_010086980.1	1e-139	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1156	34	110

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	3e-46	WRKY DNA-binding protein 75

Link Out ? help Back to Top
Entrez Gene	21393432