PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010087384.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 695aa    MW: 77643.7 Da    PI: 10.4476
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010087384.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.4e-111057244
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrw 44
                     ++W t E++ll++av+++G+++W++Ia +++       +t+++c++++
   XP_010087384.1 10 QPWGTLEELLLACAVNRHGTKSWDSIAMEVQnrtssAFLTPENCRHKF 57
                     79*****************************88888777889999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007174.7E-6863IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.9E-5945IPR009057Homeodomain-like
PfamPF002491.2E-101060IPR001005SANT/Myb domain
SuperFamilySSF466891.4E-51064IPR009057Homeodomain-like
PROSITE profilePS500906.0751161IPR017877Myb-like domain
CDDcd001673.04E-61161No hitNo description
SMARTSM002972.2E-698437IPR001487Bromodomain
CDDcd043693.50E-13346432No hitNo description
SuperFamilySSF473702.62E-14350434IPR001487Bromodomain
Gene3DG3DSA:1.20.920.101.1E-12353436IPR001487Bromodomain
PfamPF004391.1E-7356422IPR001487Bromodomain
PROSITE profilePS5001410.277367418IPR001487Bromodomain
Gene3DG3DSA:1.20.920.101.1E-12602623IPR001487Bromodomain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    Send to blast
MAREHETSVQ PWGTLEELLL ACAVNRHGTK SWDSIAMEVQ NRTSSAFLTP ENCRHKFDDL  60
KRRFMMSDKD DDEKSSSTMV DQLKKIRVDE LRREVRRRDD SIVSLELKVK RMEEERERSL  120
KEEEASGPEK KKKNLDGDDG VTGAGDGETS SENRGGGGGG RSKSGDDGSE SCDRENRSFN  180
ESNSTGQKRN DFQRNGVVSV KAEPGPEPER NESDRSESER GGKAEEDEGD NVARGENSAK  240
QSSEAQSSMS LSKRKRRRVG GGGGGSSSGE EPEETEGDEV SPATKRLSAL KSEPFVKLLG  300
IIRSHRLGSV FQRRLRSQEG NGNARVMGGA AWAVRMCGLC THPSPKSEPY DFFVWFRLVV  360
GMESQRYKNL IRQHMDLQTV EARLEKGLYL DSSLKFFRDL LLVFNNGVVF FRKGSQEHVA  420
ARELRALVLK EMSKDKKLVR SQTLTVKRED RNSVVLPKPQ NNNVKKSSII VTCGKRGGSS  480
TKALSSEVSN RKGFDHKKER VVEEKQKSVN EKKINGSFVA IEDKGIRKKR SQERVGRRGS  540
KTGNNGSGES EREFGGNELS SHDALEVKMD KKEAVKKKQG VASFLKRMKQ NSPKQAAEED  600
VSEEDSEDSK VEKEEEKKRN KGKSKKASPT KERVTRSSTH GKGTKEESQK GKRGVGRPPK  660
RPEKVVAANG KRRRDNADQS EVGVVGGRPR KRSRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1252257KRKRRR
2253257RKRRR
3254258KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010087384.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024020531.10.0uncharacterized protein LOC21401380
TrEMBLW9QD950.0W9QD95_9ROSA; Uncharacterized protein
STRINGXP_010087384.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18702972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44430.11e-30DNA-binding bromodomain-containing protein