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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_010087391.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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| Family | AP2 | ||||||||
| Protein Properties | Length: 133aa MW: 14657.1 Da PI: 8.4528 | ||||||||
| Description | AP2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 22.7 | 2.6e-07 | 110 | 130 | 1 | 21 |
AP2 1 sgykGVrwdkkrgrWvAeIrd 21
s+y+GV++++++grW+++I+
XP_010087391.1 110 SQYRGVTFYRRTGRWESQIWF 130
78*****************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 133 aa Download sequence Send to blast |
MLGLNLSVAS SDTASDSAEK LLESSFSFDD DYYCSSSSEV DRVRTIDLFP ITGGDPSEKE 60 KNSSSSSRRE WLGLSTNATA SFWEGSFGGP TPAAVAAMKK SRRGPRSRSS QYRGVTFYRR 120 TGRWESQIWF VIG |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | XP_010087391.1 |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_010087391.1 | 1e-91 | ethylene-responsive transcription factor RAP2-7 | ||||
| TrEMBL | W9QYC9 | 2e-90 | W9QYC9_9ROSA; AP2-like ethylene-responsive transcription factor TOE2 | ||||
| STRING | XP_010087391.1 | 4e-91 | (Morus notabilis) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G60120.2 | 1e-08 | target of early activation tagged (EAT) 2 | ||||
| Link Out ? help Back to Top | |
|---|---|
| Entrez Gene | 21401387 |




