PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010088441.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NF-YB
Protein Properties Length: 69aa    MW: 7076.74 Da    PI: 4.8794
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010088441.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB41.82.5e-133356597
           NF-YB 65 ddllwalatlGfedyveplkvylkkyrelegek 97
                     dllwa+a+lGf+dyvepl+v+l+ yre e+e+
  XP_010088441.1  3 VDLLWAMAKLGFDDYVEPLTVFLNGYRESETEH 35
                    59***************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.101.2E-8337IPR009072Histone-fold
SuperFamilySSF471132.51E-6438IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MAVDLLWAMA KLGFDDYVEP LTVFLNGYRE SETEHTNPGR HEPFLRRGGS GSGGGGGGGG  60
GGSSSSSMA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15162SGGGGGGGGGGS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010088441.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010088443.12e-21nuclear transcription factor Y subunit B-3
TrEMBLW9QFS53e-41W9QFS5_9ROSA; Nuclear transcription factor Y subunit B-9
STRINGXP_010088441.15e-42(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21970.12e-14NF-YB family protein