PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010089317.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 124aa    MW: 14362.9 Da    PI: 6.2607
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010089317.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.66.1e-0898123230
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkr 30 
                     +++GVr+++ +g+++AeIrd ++ng  kr
  XP_010089317.1  98 HFRGVRRRP-WGKYAAEIRDRKKNG--KR 123
                     58*******.**********77777..44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-898124IPR001471AP2/ERF domain
PROSITE profilePS5103210.90398124IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-598124IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MSRVMTCSES DFALLHTIRE QLLREDQFDN SLDSSDSPMY CRSSSFSNIF LAESWSAELP  60
FKENDTDDMS VTPARGDDTP TDTARDSHVP PQMERNMHFR GVRRRPWGKY AAEIRDRKKN  120
GKRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010089317.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010089318.12e-53ethylene-responsive transcription factor 13
TrEMBLW9R3X22e-87W9R3X2_9ROSA; Ethylene-responsive transcription factor 13
STRINGXP_010089317.13e-88(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51233157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-22ethylene-responsive element binding factor 13