PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010089596.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family B3
Protein Properties Length: 122aa    MW: 14347.6 Da    PI: 8.4759
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010089596.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.51.5e-10898587
                    -..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3  5 ltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr 87
                    lt sdv ++  l++pk+  + +       +++ +++++l   d  g  We+++ +r+k++    ++ ++GW +Fv+ +gL +gD+v++  +++
  XP_010089596.1  8 LTESDVRAK--LSVPKEWWDIIirplfgdELDRRREIELWAVDGVGMFWEFRCAVRQKGRYkkpVLQSDGWLKFVNYKGLGVGDMVILDTVEN 98
                    555666655..899999985559999999888899999999999*********8744444456567779******************996643 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019368.76E-126100IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.7E-116103IPR015300DNA-binding pseudobarrel domain
CDDcd100171.38E-7893No hitNo description
PfamPF023621.9E-8998IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MAGLPKWLTE SDVRAKLSVP KEWWDIIIRP LFGDELDRRR EIELWAVDGV GMFWEFRCAV  60
RQKGRYKKPV LQSDGWLKFV NYKGLGVGDM VILDTVENQF RGTRFLLRAC KYDADGQCWF  120
DV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010089596.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLW9QIC02e-83W9QIC0_9ROSA; Uncharacterized protein
STRINGXP_010089596.14e-84(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2060778