PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010089610.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 513aa    MW: 57212.9 Da    PI: 6.6838
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010089610.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002782102323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C+ Cgk F +   L  H+r H
  XP_010089610.1  82 CQVCGKGFDSMRALFGHMRHH 102
                     *******************99 PP
2zf-C2H215.93.7e-05114134323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C++Cgk F +   L  H+++H
  XP_010089610.1 114 CKKCGKEFESLRALIGHMKSH 134
                     ********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.07E-5635No hitNo description
PfamPF139123.6E-6831IPR007087Zinc finger, C2H2
PROSITE profilePS501579.64936IPR007087Zinc finger, C2H2
SMARTSM003550.51931IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
PROSITE profilePS5015712.15480107IPR007087Zinc finger, C2H2
SMARTSM003550.02380102IPR015880Zinc finger, C2H2-like
SuperFamilySSF576674.86E-981134No hitNo description
PROSITE patternPS00028082102IPR007087Zinc finger, C2H2
PfamPF139123.1E-582104IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.604.6E-482106IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015712.424112139IPR007087Zinc finger, C2H2
SMARTSM003550.0017112134IPR015880Zinc finger, C2H2-like
PfamPF139121.2E-7113136IPR007087Zinc finger, C2H2
PROSITE patternPS000280114134IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.602.8E-5114140IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.7E-4347369IPR007087Zinc finger, C2H2
SMARTSM003550.12347369IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.9E-9347369No hitNo description
PROSITE profilePS5015710.741347374IPR007087Zinc finger, C2H2
PROSITE patternPS000280349369IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.607.8E-4419449IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.9E-9421448No hitNo description
PfamPF139121.7E-9426448IPR007087Zinc finger, C2H2
SMARTSM003550.17426448IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.118426453IPR007087Zinc finger, C2H2
PROSITE patternPS000280428448IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    Send to blast
MDQDQEQRHV CRFCNKSFLS GKVLGGHMRC HGTKKLNNKS EKDGGERSGY GYGLRVNPKK  60
SSRISGSNDH DFDSSSGQEI FCQVCGKGFD SMRALFGHMR HHSGKKKKKE QIHCKKCGKE  120
FESLRALIGH MKSHSSEKRF VLGGGVQREK LFGETSQLVR KKRSRRLLRY RAVSPNCSFS  180
YNNMSECSSG VELLDHDKEV EEVAFCLLML SRGVHSWDEF CSVAESSDNS ESPNHIPGNG  240
DGDGDGDGDD GWLKLVKKPR LEMLELFGGK KVSDFSENDF GLGNDGEEKM VSLEASVSNG  300
DTDYEKEKES EDGIGNINSV GLEFDENQRE EVIVGADLVS HSKKSEYKCR TCNKIFHSHQ  360
ALGGHQTIHR LAKNSFPAFQ FDVTAARCSD FPGIEAEPND NSMEMEMEMD RVTLTSYESN  420
TNNKEHKCPI CFKVFASGQA LGGHKRAHTV RDSEVEADQI TLMKQEVCNI SDVLDVGVSL  480
TLGDINANNG VQLKPWWVKN DHKHEVLVGL VPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104115KKKKKEQIHCKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010089610.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010089610.20.0zinc finger protein ZAT4
TrEMBLW9QIN40.0W9QIN4_9ROSA; Zinc finger protein ZAT9
STRINGXP_010089610.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133592027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.18e-15C2H2-like zinc finger protein