PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010090934.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 322aa    MW: 36140.3 Da    PI: 6.0302
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010090934.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-193079255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  XP_010090934.1 30 RFLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 79
                    688******.**********965...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.05E-312986No hitNo description
PfamPF008473.5E-123079IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-293087IPR001471AP2/ERF domain
SMARTSM003802.3E-343093IPR001471AP2/ERF domain
PROSITE profilePS5103220.7193087IPR001471AP2/ERF domain
SuperFamilySSF541715.43E-213088IPR016177DNA-binding domain
PRINTSPR003674.4E-83142IPR001471AP2/ERF domain
PRINTSPR003674.4E-85369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009739Biological Processresponse to gibberellin
GO:0010030Biological Processpositive regulation of seed germination
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MSSNINNSNN KMKKKQDLVQ AGTDDKTSPR FLGVRRRPWG RYAAEIRDPS TKERHWLGTF  60
DTAEEAALAY DRAARSMRGS RARTNFVYSD MPPGSSVTSI LSPDDQNGHL FVNVAAAAGH  120
DHDDRRRHQQ LGGLVTQAPP PDPTPQPQLL YDHQDEAMMM MMMSLGEANG IHRAQAQVIM  180
SNNNYQHENY NYISNDHDED HHRHPMAIIN SSSSELPPFP ASEFNSDDQY HYYNCNTAST  240
SNSNSSNIMQ AGAGAMNMMM QDSSCEDQYG YNYSYNSNYV HSPLFSTMPS VSNSDHHHSQ  300
SQSQFPDPFD LGSTTTSSSF FF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-203186359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00509DAPTransfer from AT5G13910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010090934.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010090934.20.0ethylene-responsive transcription factor LEP
TrEMBLW9QM180.0W9QM18_9ROSA; Ethylene-responsive transcription factor LEP
STRINGXP_010090934.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39043161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-29ERF family protein