PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091472.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 228aa    MW: 24346.3 Da    PI: 9.3848
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091472.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.6e-212676256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrdps+   + r++lg+f+taeeAa+a++aa+++++g+
  XP_010091472.1 26 HYRGVRKRP-WGRYAAEIRDPSK---KSRVWLGTFDTAEEAARAYDAAAREFRGA 76
                    6********.**********965...6*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103224.3812683IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-332683IPR001471AP2/ERF domain
SMARTSM003804.4E-392689IPR001471AP2/ERF domain
CDDcd000181.36E-192685No hitNo description
SuperFamilySSF541715.62E-232684IPR016177DNA-binding domain
PfamPF008473.8E-142675IPR001471AP2/ERF domain
PRINTSPR003671.4E-112738IPR001471AP2/ERF domain
PRINTSPR003671.4E-114965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MAIKDRIGVK KNHINKGNVS DGKEVHYRGV RKRPWGRYAA EIRDPSKKSR VWLGTFDTAE  60
EAARAYDAAA REFRGAKAKT NFPILPCAGT TATEPPSEAR SPSQSSTVES SGNGFPAREP  120
ARHLGGGLFP FLHQQTDSLP LPPHHLVAAY GGLVPTRPVL FFDALSRPEF MTPVYPVRFD  180
PVAVEFGSGG KAGSGGAQSE SDSSSVVEGQ PGKVVLDLDL NLAPPGEA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-222689569ATERF1
3gcc_A7e-222689569ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00623PBMTransfer from PK19363.1Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010091472.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010091472.21e-167ethylene-responsive transcription factor 4
TrEMBLW9QW031e-165W9QW03_9ROSA; Ethylene-responsive transcription factor 4
STRINGXP_010091472.11e-166(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-29erf domain protein 9