PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091735.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NF-X1
Protein Properties Length: 1109aa    MW: 121101 Da    PI: 8.0213
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091735.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X122.23e-07303321119
        zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                     CG+H+C++ CH+G C++C+
  XP_010091735.1 303 CGRHRCERVCHLGACDQCQ 321
                     ******************6 PP
2zf-NF-X1193.1e-06520538119
        zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                     CG+H+Cq+lCH G CppC 
  XP_010091735.1 520 CGQHSCQSLCHSGHCPPCL 538
                     ******************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500168.787133194IPR019787Zinc finger, PHD-finger
SuperFamilySSF578503.53E-7135195No hitNo description
PROSITE patternPS013590136191IPR019786Zinc finger, PHD-type, conserved site
PROSITE profilePS500899.45136192IPR001841Zinc finger, RING-type
CDDcd060089.60E-6225286No hitNo description
SMARTSM004380.023248266IPR000967Zinc finger, NF-X1-type
PfamPF014228.3250265IPR000967Zinc finger, NF-X1-type
CDDcd060086.00E-11293341No hitNo description
SMARTSM004384.5E-4303322IPR000967Zinc finger, NF-X1-type
PfamPF014221.9E-5303320IPR000967Zinc finger, NF-X1-type
CDDcd060081.49E-7357402No hitNo description
SMARTSM004382.0E-4367386IPR000967Zinc finger, NF-X1-type
PfamPF014220.022367384IPR000967Zinc finger, NF-X1-type
CDDcd060087.28E-13415463No hitNo description
SMARTSM004383.2E-5425444IPR000967Zinc finger, NF-X1-type
PfamPF014225.3E-4427442IPR000967Zinc finger, NF-X1-type
SMARTSM0043895482512IPR000967Zinc finger, NF-X1-type
PfamPF0142218482493IPR000967Zinc finger, NF-X1-type
CDDcd060084.26E-9510562No hitNo description
SMARTSM004381.2E-4520539IPR000967Zinc finger, NF-X1-type
PfamPF014227.4E-5520537IPR000967Zinc finger, NF-X1-type
CDDcd060082.92E-5567615No hitNo description
SMARTSM004380.036577595IPR000967Zinc finger, NF-X1-type
PfamPF0142223577594IPR000967Zinc finger, NF-X1-type
SMARTSM004385.5630660IPR000967Zinc finger, NF-X1-type
PfamPF014220.22630645IPR000967Zinc finger, NF-X1-type
CDDcd060082.45E-4658707No hitNo description
PfamPF0142249662680IPR000967Zinc finger, NF-X1-type
SMARTSM004380.33669690IPR000967Zinc finger, NF-X1-type
PfamPF014243.2E-5801865IPR001374R3H domain
Gene3DG3DSA:3.30.70.3306.8E-6904961IPR012677Nucleotide-binding alpha-beta plait domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0000166Molecular Functionnucleotide binding
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1109 aa     Download sequence    Send to blast
MSSNVSSERR DNNRPTRFAS QTARQEWVPR GATTTMTVVN PVLSSDSNTT GNGGRDSNHG  60
STTSQSRSRG NNSSTGSRGQ VNRWTNHRRE REKKEKERSV TQERSTSEDE GVLKDVNLPH  120
LVQEIQDKLM KGAVECMICY DMVRRSAAIW SCSSCYSIFH LNCIKKWARA PTSVDLSVEK  180
NQGFNWRCPG CQSAQLTSLK EIRYVCFCGK RPDPPSDLYL TPHSCGEPCG KHLERDFLVP  240
GESEEDLCPH VCVLQCHPGP CPPCKAFAPP RRCPCGKKTT TTRCSDRKSV LTCGQRCNKV  300
LECGRHRCER VCHLGACDQC QVLVSASCFC KKMVEVVLCG DMILKGEVKA EDGVFSCSSL  360
CEKKLNCDNH FCSEVCHPGS CGECNLLPSK TKTCHCGKTV LEEERQSCLD PIPTCSQICK  420
KPLPCRKHFC EEVCHAGDCP PCLVKVEQKC RCSSTSRYVE CYKTTSDEKF TCDKACGRKK  480
SCGRHRCSER CCPLSNSSST YLGDWDPHFC SMSCGKKLRC GQHSCQSLCH SGHCPPCLET  540
IFTDLTCACG RTSLPPPLPC GTPTPSCQLP CLVLQPCGHS SSHSCHFGDC PPCSVPVAKE  600
CIGGHVVLRN IPCGSRDIRC NKLCGKTRQC GMHACGRTCH PPPCDAHTES EPGLRSSCGQ  660
TCGAPRRDCR HTCTAPCHPS YLCPDVRCNF PVTITCSCGR ITASVPCDAG GNNGGFNTDT  720
VYEASVLQKL PVPLQPVEAC GKKIPLGQRK LMCDDECAKL ERKRVLADAF DIATTNLDAL  780
HFGESSVVSE LLTDLYRRDP KWVLSVEERC KYLVLGKSKG TTSGLKVHVF CPMQKDKRDV  840
IRVIVERWKL TVSSAGWEPK RFIVVHVTPK SKAPPRVLGV KGTTTVNALH PPAFDPLVDM  900
DPRLVVSFPD LPRDADISAL VLRFGGECEL VWLNDKNALA VFHDPARAAT AMRRLDHGSV  960
YHGAVLGQPA AGASLSSGTN AWGGVGTAKG NPWKKVVVQE SGWKEDSWGG EEWLSGGSAD  1020
VQASVWKKEA PLAASLNRWS VLDHETTSSS SPTSVGVKVS AKENTGGTHP NLGSSTSVVN  1080
PTRQLVGNIT GTDTSEVVDD WEKAYDTME
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18794RREREKKE
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010091735.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010091735.10.0NF-X1-type zinc finger protein NFXL1
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLW9QPA30.0W9QPA3_9ROSA; NF-X1-type zinc finger protein NFXL1
STRINGXP_010091735.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69723145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1