PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091860.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 922aa    MW: 103172 Da    PI: 4.5753
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091860.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-08861913146
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT....TTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg....kgRtlkqcksrwqk 46 
                      + +WT  E+++l++a++++  +    Wk I +       kgRt  ++k++w++
   XP_010091860.1 861 KVPWTVAEEKKLKEAIQKFSHEkkiPWKEILKFGDsvfvKGRTTVDLKDKWRN 913
                      579*****************99*********9988*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.40.101.4E-7578628IPR013083Zinc finger, RING/FYVE/PHD-type
SMARTSM002493.6E-5581626IPR001965Zinc finger, PHD-type
SuperFamilySSF579034.65E-8581628IPR011011Zinc finger, FYVE/PHD-type
PROSITE profilePS500907.561856915IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.604.0E-11857916IPR009057Homeodomain-like
SuperFamilySSF466891.35E-10858916IPR009057Homeodomain-like
SMARTSM007172.0E-6860917IPR001005SANT/Myb domain
CDDcd116601.94E-13862916No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 922 aa     Download sequence    Send to blast
MSSDTDDTSF SNESDSDSSL SLFCVQFHQF VLGFEEKGCS MDDMLDSEKV LAWLWVIEAM  60
ASFKEVGPSL LHDVVQSAPE LPDDLGKNTR EMIALRCLED FIAPQDGITS DAPSAAGSKV  120
QFDLSEGCQD VLQRILQETS VSNLRAAGLE LSKWDIHPFI QHKRACLPKC ALEQLKDAIL  180
NGTHQYADFL REKSGLASTS RDNGICRNGN NRDSVTSRPN LNHSDVLNMR VGVNSDPLII  240
ENRNNQLGDN VLPSKRTRPD LADKDMAGFQ ENCNETNNFD VQHISSKRVK QYASSANESA  300
EQNSVPLHGR EPLKDSSEVN VPVATTGHDL AESEMGTMDE GRVLEDRCNE CAVTKRSQKS  360
SKNGFHKNLS EVPCNAPQMP QVTSRDEGHQ NFSVDEAQGE AEYCAQPTEA FQSLEQKQVS  420
IHGKQPLEDS SQRDLLANVE ERMVLEDGLD GCSVSKRSEQ VDKSDLPKND SEVPHNAPEP  480
SGAFAAETAH KSPTKESKSS YEHDLQFLEP NSASCDRLQQ EIIAGEAEQD INNCDEEQTS  540
SDNDEHNNEL NDLAKKKHEF LSSQCTDNHD SMVVDWTEQN LCMKFNEDGH LLVCNTNNCQ  600
LVVHEKCVGS PATLDDKGNF YCPFCAYSIA INEYLEAKKS SSLARKELAA FIRMGSEHRP  660
MEDTNVLNKK KSHYAGGNED EVFLGKTHEN EQVGEREQNE ANQVETNVNI DDNNQQAEFS  720
PPRNDTFNLG HREERTSIDS EMLHVTAGEK EGEEKVLEEC PSESGTEGEQ DEVPGKSDVV  780
SHANTDTDLV NQGIEDLRVQ REVLKGQEIN ASKRFVYEFN INSDDEDDYD DKLTISNYCV  840
KLRGREVPCN FRGIPQSRRK KVPWTVAEEK KLKEAIQKFS HEKKIPWKEI LKFGDSVFVK  900
GRTTVDLKDK WRNMSKGTPK SK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1668672KKKSH
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010091860.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024018435.10.0uncharacterized protein LOC21385959
TrEMBLW9RBC50.0W9RBC5_9ROSA; Uncharacterized protein
STRINGXP_010091860.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38722224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17460.11e-07TRF-like 3