PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091883.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family B3
Protein Properties Length: 115aa    MW: 13772 Da    PI: 10.3903
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091883.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.61.6e-111188983
                    HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEE CS
              B3  9 dvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFk 83
                    +  k + +++p + ++ +  +  +  +++++  d +g  We+++ +rk+++    ++ ++GW +Fv+ +gL++gD ++++
  XP_010091883.1 11 NDEK-RKFSVPAEWLR-IlpDFREGHEVMVKAVDGKGFYWEFNCVIRKRGRYrkpVFQSQGWLKFVNKKGLRVGDKIILY 88
                    3333.34899999994.55855566778899999999*******8755554457677889*****************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100172.76E-10488No hitNo description
SuperFamilySSF1019364.45E-10590IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.7E-12593IPR015300DNA-binding pseudobarrel domain
PfamPF023622.5E-91288IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
MAPLQKYLTE NDEKRKFSVP AEWLRILPDF REGHEVMVKA VDGKGFYWEF NCVIRKRGRY  60
RKPVFQSQGW LKFVNKKGLR VGDKIILYEG EDLFRGTKYR IRAQKCNREG LWVDV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010091883.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021824681.11e-28uncharacterized protein LOC110765763
TrEMBLW9QZS66e-79W9QZS6_9ROSA; Uncharacterized protein
STRINGXP_010091883.11e-79(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2060778