PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010092997.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WOX
Protein Properties Length: 226aa    MW: 26105.4 Da    PI: 9.1471
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010092997.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox672.5e-21767257
                    T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++R+++t+eql +Lee+++  +r+p+a+++++++++l    +++ ++V++WFqN++a++++
  XP_010092997.1  7 SSRWCPTPEQLMILEEMYRAgTRTPNASQIQQITAHLsfygKIEGKNVFYWFQNHKARDRQ 67
                    58*****************99*************************************996 PP
2Wus_type_Homeobox120.66.6e-39668264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +++RW+PtpeQ++iLee+y++G+rtPn+++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk
     XP_010092997.1  6 NSSRWCPTPEQLMILEEMYRAGTRTPNASQIQQITAHLSFYGKIEGKNVFYWFQNHKARDRQK 68
                       589***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.608368IPR001356Homeobox domain
SMARTSM003893.1E-5572IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.3E-8867IPR009057Homeodomain-like
PfamPF000464.9E-19867IPR001356Homeobox domain
SuperFamilySSF466894.71E-12868IPR009057Homeodomain-like
CDDcd000863.25E-5968No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009908Biological Processflower development
GO:0009943Biological Processadaxial/abaxial axis specification
GO:0009947Biological Processcentrolateral axis specification
GO:0010865Biological Processstipule development
GO:0048513Biological Processanimal organ development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MSPAANSSRW CPTPEQLMIL EEMYRAGTRT PNASQIQQIT AHLSFYGKIE GKNVFYWFQN  60
HKARDRQKLR RKLYKQLQQQ QLYHHQQQQQ QQQQLMINSI QQNHHFLTSA SSSSSSSFHQ  120
QLSCYSSSPS AGSIPQVQAV GDHASTHHQL MSYSWKMEIP LEKENSMMRL YDRDWTMMVD  180
VGPPNSPCCN NYKPLKTLEL FPITATNLKE ECTTSKHVPH STSTTN
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor required to initiate organ founder cells in a lateral domain of shoot meristems. Involved in the lateral sepal axis-dependent development of flowers, probably by regulating the proliferation of L1 cells at the lateral region of flower primordia. Required for the formation of the margin cells of the first and second whorl organs. {ECO:0000269|PubMed:11751640, ECO:0000269|PubMed:15169755}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010092997.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010092997.11e-170WUSCHEL-related homeobox 3A
SwissprotQ9SIB43e-49WOX3_ARATH; WUSCHEL-related homeobox 3
TrEMBLW9REK61e-169W9REK6_9ROSA; WUSCHEL-related homeobox 3
STRINGXP_010092997.11e-169(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106322940
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.13e-37WOX family protein
Publications ? help Back to Top
  1. Chandler JW,Werr W
    Arabidopsis floral phytomer development: auxin response relative to biphasic modes of organ initiation.
    J. Exp. Bot., 2014. 65(12): p. 3097-110
    [PMID:24744428]
  2. Niu L, et al.
    LOOSE FLOWER, a WUSCHEL-like Homeobox gene, is required for lateral fusion of floral organs in Medicago truncatula.
    Plant J., 2015. 81(3): p. 480-92
    [PMID:25492397]
  3. Alvarez JP,Furumizu C,Efroni I,Eshed Y,Bowman JL
    Active suppression of a leaf meristem orchestrates determinate leaf growth.
    Elife, 2017.
    [PMID:27710768]
  4. Guan C, et al.
    Spatial Auxin Signaling Controls Leaf Flattening in Arabidopsis.
    Curr. Biol., 2017. 27(19): p. 2940-2950.e4
    [PMID:28943086]