PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010093361.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bHLH

Protein Properties

Length: 532aa MW: 57951.6 Da PI: 6.6378

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010093361.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.6	0.00026	439	471	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A++YIk Lq XP_010093361.1 439 DRITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 471 6788888888887.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.271	421	470	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.6E-8	436	475	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	7.33E-9	436	479	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.56E-4	439	475	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence Send to blast
MAEECAENSV ATSSSLAVVP QPNWWDLHGA GSALSSWCNN NNSNTTSSNT NNLNTWHHQA 60 APPPNPSSNS DEDVSISTSF TTNASNHSGL TVESSRRLVE PAASSSDDLI APEQQAPSDS 120 HIWSHVFLNV GSNGDLQNHH DVGENFLDML SSSKTMYDPA CNYLKKLDSS WDHDFSNSSS 180 TFNNFTDHKP LNGFNDTMNV ENERLTNKLS SLISTWSIAP PEPEINDNRL FSPQTCDISL 240 SSSMNHHHFS QSHNLGQLKP TLGDSAGLFP PCYFHNMKVE NGHGGGEMEA PASAATTGAL 300 LRRSLNSSNG STGYQVGLNG SPNMAVDNVK YHYGMPSKNF ADVISFAGRL GKPLIATDGP 360 NNKPSVKSLS LSDSKKQGLP TSSPQTRGST GRGQGNTNNE GKKKRSEDTN SETSLKKQKQ 420 ESSTASSAKI QAPKVKLGDR ITALQQIVSP FGKTDTASVL YEAIQYIKFL QEQVQDPWGN 480 FDRKDHFKGD HVKLDLRSRG LCLVPVSCTP QVYRENTGSD YWTPTYRGCL YR

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence Send to blast

MAEECAENSV ATSSSLAVVP QPNWWDLHGA GSALSSWCNN NNSNTTSSNT NNLNTWHHQA  60
APPPNPSSNS DEDVSISTSF TTNASNHSGL TVESSRRLVE PAASSSDDLI APEQQAPSDS  120
HIWSHVFLNV GSNGDLQNHH DVGENFLDML SSSKTMYDPA CNYLKKLDSS WDHDFSNSSS  180
TFNNFTDHKP LNGFNDTMNV ENERLTNKLS SLISTWSIAP PEPEINDNRL FSPQTCDISL  240
SSSMNHHHFS QSHNLGQLKP TLGDSAGLFP PCYFHNMKVE NGHGGGEMEA PASAATTGAL  300
LRRSLNSSNG STGYQVGLNG SPNMAVDNVK YHYGMPSKNF ADVISFAGRL GKPLIATDGP  360
NNKPSVKSLS LSDSKKQGLP TSSPQTRGST GRGQGNTNNE GKKKRSEDTN SETSLKKQKQ  420
ESSTASSAKI QAPKVKLGDR ITALQQIVSP FGKTDTASVL YEAIQYIKFL QEQVQDPWGN  480
FDRKDHFKGD HVKLDLRSRG LCLVPVSCTP QVYRENTGSD YWTPTYRGCL YR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010093361.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024019427.1	0.0	transcription factor mef2A
TrEMBL	W9R1C9	0.0	W9R1C9_9ROSA; Uncharacterized protein
STRING	XP_010093361.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF10116	26	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	3e-48	bHLH family protein

Link Out ? help Back to Top
Entrez Gene	21405713