PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010093366.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WOX
Protein Properties Length: 347aa    MW: 39597.8 Da    PI: 10.305
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010093366.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox665e-2182142257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     ++R+++t+eql +L+el+++ +r+p+a++++e+++kl    +++ ++V++WFqN++a++kk
  XP_010093366.1  82 STRWSPTPEQLMALQELYRRgTRTPTAQQIQEITAKLrrfgKIEGKNVFYWFQNHKARDKK 142
                     68*****************99**************************************98 PP
2Wus_type_Homeobox110.21.2e-3581144265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++tRW+PtpeQ++ L+ely++G+rtP++++iq+ita+L+++Gkie+kNVfyWFQN+kaR+++kq
     XP_010093366.1  81 QSTRWSPTPEQLMALQELYRRGTRTPTAQQIQEITAKLRRFGKIEGKNVFYWFQNHKARDKKKQ 144
                        579***********************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007111.28978143IPR001356Homeobox domain
SMARTSM003892.9E-680147IPR001356Homeobox domain
SuperFamilySSF466896.84E-1282146IPR009057Homeodomain-like
CDDcd000863.55E-683144No hitNo description
Gene3DG3DSA:1.10.10.603.9E-983143IPR009057Homeodomain-like
PfamPF000461.6E-1883142IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MGCSTADHGN QLKPRSSFKD LKLRPLITYS PVKTTVVYQA TPVTDCSAKS SAQDNNNSSI  60
VNITEQRRKK DLNIAQVVPL QSTRWSPTPE QLMALQELYR RGTRTPTAQQ IQEITAKLRR  120
FGKIEGKNVF YWFQNHKARD KKKQRLKVDQ SRRLKIERHQ YDYSKSLGTK TSVLCSGPRV  180
TGLEVEPTKR EPLSNYSRIS EESVNSMPRV TIAERRTNKL VAFEEKESQL IKNTQEKHAS  240
WKPMEMSYTF PSYNNDLKRT RSTVISVTFD EKLLEKTQDY NASLMPNSKE GFTSFGNGIS  300
GETTTTTLEL FPLLSDNLKG SQSKDQAPKI SSMTRDSDFK QDLSLSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138144RDKKKQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010093366.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093366.20.0WUSCHEL-related homeobox 1
TrEMBLW9R1D30.0W9R1D3_9ROSA; WUSCHEL-related homeobox 1
STRINGXP_010093366.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106322940
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.18e-33WUSCHEL related homeobox 1