PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010093427.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 176aa    MW: 19777.7 Da    PI: 8.8337
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010093427.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.6e-203081256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdps +g  +r +lg+f+taeeAa+a+++a+ +++g+
  XP_010093427.1 30 RYRGVRRRP-WGKFAAEIRDPSRQG--ARLWLGTFDTAEEAARAYDRAAFNFRGH 81
                    6********.**********96543..*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.1E-373094IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-243089IPR016177DNA-binding domain
PfamPF008476.2E-153081IPR001471AP2/ERF domain
CDDcd000186.46E-303089No hitNo description
Gene3DG3DSA:3.30.730.109.2E-323090IPR001471AP2/ERF domain
PROSITE profilePS5103225.3173088IPR001471AP2/ERF domain
PRINTSPR003671.1E-113142IPR001471AP2/ERF domain
PRINTSPR003671.1E-115470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MDNPNRRNHH QDQQEKDNEG RAGSREEAVR YRGVRRRPWG KFAAEIRDPS RQGARLWLGT  60
FDTAEEAARA YDRAAFNFRG HLAILNFPNE YYSRVMGSPP YPPHISFSGS ASASTFAPSS  120
SGSAASSVGR LQRGFERGDS SRSSPPVAAP QEVFEIEYLD DKVLEELLDS EKEKKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-291891275Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010093427.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093427.11e-126ethylene-responsive transcription factor ERF098
SwissprotQ9LTC51e-47ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLW9R4271e-125W9R427_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010093427.11e-126(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.18e-31ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]