PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010093604.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 229aa    MW: 27010.7 Da    PI: 7.7298
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010093604.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.33.1e-32101372128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknr.atk..sgyWkatgkdke 91 
                     p G+rF+Pt+ elv++yL++kv +k+++  +  ++e+++y++ P++L++k+   +e+e+y F+kr  k+++gkr +r +t+  +g+Wka+  + +
  XP_010093604.1  10 PIGIRFSPTEVELVDYYLANKVMNKPFQDPTNrFQELELYNYTPKKLQEKYGVqKEHEMYIFVKRMLKHQKGKRLQRrITDgsNGFWKASTGEVK 104
                     89************************7775555**************965544156699***************98856657799***9999999 PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +    g lvg ++tLv+y   +++g+kt+W+m eyrl
  XP_010093604.1 105 IEL-AGVLVGHRRTLVYY---KSEGQKTNWLMYEYRL 137
                     999.999***********...78999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-364155IPR003441NAC domain
PROSITE profilePS5100536.3419156IPR003441NAC domain
PfamPF023652.7E-1910137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEITPVNLFP IGIRFSPTEV ELVDYYLANK VMNKPFQDPT NRFQELELYN YTPKKLQEKY  60
GVQKEHEMYI FVKRMLKHQK GKRLQRRITD GSNGFWKAST GEVKIELAGV LVGHRRTLVY  120
YKSEGQKTNW LMYEYRLPDH YFVQLDDWLL CKVYLNEKEE TKSKTRLNSA LESTVIINTN  180
IDIQQAKYSS ASHANSNSDI QQQFQEAIFT EAPWTMDDLF QIAEYSSHL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-22916015171Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010093604.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093604.11e-173NAC transcription factor 29
TrEMBLW9QTX91e-172W9QTX9_9ROSA; NAC domain-containing protein 29
STRINGXP_010093604.11e-172(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-28NAC-like, activated by AP3/PI