PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010094157.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CAMTA
Protein Properties Length: 1064aa    MW: 119574 Da    PI: 6.5159
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010094157.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11261.5e-395613044118
            CG-1  44 rkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118
                     ++++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+een++fqrrcyw+Lee+l +iv+vhylevk
  XP_010094157.1  56 HQVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQRRCYWMLEEDLMHIVFVHYLEVK 130
                     4789********************************************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143754.56625135IPR005559CG-1 DNA-binding domain
SMARTSM010761.1E-4233130IPR005559CG-1 DNA-binding domain
PfamPF038599.1E-3357129IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.1E-5451552IPR013783Immunoglobulin-like fold
PfamPF018335.9E-6467546IPR002909IPT domain
SuperFamilySSF812962.0E-14467552IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.8E-15650774IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029714.769651783IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.2E-15652773IPR020683Ankyrin repeat-containing domain
CDDcd002041.34E-12657771No hitNo description
PROSITE profilePS500888.763668700IPR002110Ankyrin repeat
SuperFamilySSF525403.19E-8879938IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.15887909IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.187888917IPR000048IQ motif, EF-hand binding site
PfamPF006120.0017889908IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0092910932IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.285911935IPR000048IQ motif, EF-hand binding site
PfamPF006124.7E-4913932IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1064 aa     Download sequence    Send to blast
MGNKMRKKEE GKRGTKMICN NYYQRRNIVG YAQLKFVKFF VTIKSFIFHQ SPQTGHQVLR  60
YFRKDGHNWR KKKDGKTVKE AHEKLKVGSI DVLHCYYAHG EENENFQRRC YWMLEEDLMH  120
IVFVHYLEVK GNRTNIGGIR EIDEVSQSLR EGSPQTSSSS TSHYKAPSGS TDYTSPSSTL  180
TSLCEDADSG DIHRASSRLH SYLESPQLQL KMDMGSVHPN SNLREGHLGQ SSIHGANYVP  240
HFQGDRPNYS EPATCATGYQ NTLGLGSWEE ILEQCTTGFN TVPSHVSVST SQPACTGVVH  300
EQENLVSGRL LAGESITKEE LGNSLSNYST WQISLEDNLL PLPKGLVEQS SNLEMPYDLE  360
NMLFENSTAD SSLTSSPYQL DSHLDQQTEN STEGNINYAF TLRQQLLDGE EGLKKLDSFS  420
RWVTKELGEV DDLQMQSSSG IPWSTVENVV DDSSLSPSIS QDQLFSIIDF SPKWGFTDSQ  480
PKVLIIGTFL KSRQEVEKYK WSCMFGEEEG PAEGLADGIL CCYAPPHTAG PVPFYVTCSN  540
RLACSEVREF DYKCGATKDL DIRDIYNDNT VELRLHMRLE GLLHLGSVNP TSFSFRSTVE  600
KRTLISKIIS LKEEEESHQK VDQADEKDLS QYKVKEHLFT KLMKEKLYSW LLQKATEDGK  660
GPNILDDEGQ GVLHLAAALG YNWAIKPIVT AGVSINFRDI NGWTALHWAA FYGRQGLLNL  720
KLSFAEHTVA FLVSQGAASG AVTDPSPEFP LGRSAADLAS VNGHKGISGF LAESSLTSHL  780
SSLSVNDSKE DGGAEISGTK AVQTVSERKA TPVTYGEMPD ALSLKDSLTA VRNATQAADR  840
IHQMFRMQSF ERKQLNEYDD DGCGLSDERA LSLLAGRSRK SGQNDRLAHS AAVQIQKKFR  900
GWKKRKEFLL IRQRIVKIQA HVRGHQVRKQ YRAIVWSVGI LDKVILRWRR KGSGLRGFRP  960
DAIPKEPKLP SMPIKEDEYD FFKEGRKQTE ERLQKALTRV KSMVQYPEGR AQYRRVLNVV  1020
QGLQETKVTD MALIDSEEIA DADDDVIKID QFLDDDTFMS IAFE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25627216, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010094157.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salt, wounding, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:25627216}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024019885.10.0calmodulin-binding transcription activator 2
SwissprotQ6NPP40.0CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLW9RHV90.0W9RHV9_9ROSA; Calmodulin-binding transcription activator 2
STRINGXP_010094157.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74062642
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]