PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010094187.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 360aa    MW: 40130.7 Da    PI: 4.5504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010094187.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.83e-21291402128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     ppG+rF P+deel+++yL +k +++ +e + +i+e+ + ++ P+++ +                ++ ++gkr+nr + +gyW+   ++++v+s +
  XP_010094187.1  29 PPGYRFAPSDEELIMYYLIPKSQDQIFEPNCIISEITLSDYTPEEIAA---------------TSRGNNGKRRNRLAGDGYWRLA-NTTDVYSDN 107
                     9*************************999788**************61...............23346899*****9*****976.55899999* PP

             NAM  97 gelvglkktLvfykg.rapkgektdWvmheyrl 128
                     g ++g k  L f++   + k ektdW+mhe+++
  XP_010094187.1 108 GVKIGSKSLLGFHRViPNVKEEKTDWIMHEFSV 140
                     *************876778889*********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.75E-2722173IPR003441NAC domain
PROSITE profilePS5100525.05228173IPR003441NAC domain
PfamPF023651.1E-1429139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MEVSETDHNY DQMEGYRVEE TAVLNYYCPP GYRFAPSDEE LIMYYLIPKS QDQIFEPNCI  60
ISEITLSDYT PEEIAATSRG NNGKRRNRLA GDGYWRLANT TDVYSDNGVK IGSKSLLGFH  120
RVIPNVKEEK TDWIMHEFSV LPSLDRKKKL TTLGEEDMLK LEDGYVLCQM YKRGSTKTNK  180
VLRRSNKNTE LQILPHNYVE TAPANLEYHA HDDHDQNSML LSKTPGRIDH GALTLVETPP  240
STSVSGENRN LGGLSSDAIL GAVPPTAAAD DGDELTAFLL KALDAEDYYY AQLMENSLPT  300
TATTSSSNIT DVSPQKANDK DLVLRGLEEV NQLISDFSNH ISTPIAPNWD TATTSTTCCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-182917618168NO APICAL MERISTEM PROTEIN
1ut4_B7e-182917618168NO APICAL MERISTEM PROTEIN
1ut7_A7e-182917618168NO APICAL MERISTEM PROTEIN
1ut7_B7e-182917618168NO APICAL MERISTEM PROTEIN
3swm_A8e-182917621171NAC domain-containing protein 19
3swm_B8e-182917621171NAC domain-containing protein 19
3swm_C8e-182917621171NAC domain-containing protein 19
3swm_D8e-182917621171NAC domain-containing protein 19
3swp_A8e-182917621171NAC domain-containing protein 19
3swp_B8e-182917621171NAC domain-containing protein 19
3swp_C8e-182917621171NAC domain-containing protein 19
3swp_D8e-182917621171NAC domain-containing protein 19
4dul_A7e-182917618168NAC domain-containing protein 19
4dul_B7e-182917618168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010094187.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010094187.10.0NAC transcription factor 56
TrEMBLW9RHY70.0W9RHY7_9ROSA; NAC domain-containing protein 19
STRINGXP_010094187.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.14e-22NAC domain containing protein 25