PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010094264.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 200aa    MW: 22525.4 Da    PI: 6.3111
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010094264.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-053658123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C++C++ F++   L  H++ H
  XP_010094264.1 36 YECTYCKRGFTNAQALGGHMNIH 58
                    99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.606.1E-53362IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576675.78E-73363No hitNo description
SMARTSM003550.00843658IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.6553663IPR007087Zinc finger, C2H2
PfamPF139122.1E-63660IPR007087Zinc finger, C2H2
PROSITE patternPS0002803858IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MESGKQGLIS TCSETSSEEN DQTERVNEVS GAKRSYECTY CKRGFTNAQA LGGHMNIHRK  60
DRAKTKQQAV HNTAVSSHSN YHQNEEISIA GSHHFSTTTT SVPFSSQFPA WYQPAHERNY  120
HQNMHFSPTS GYYSNYEGDH YNPFSSMASS TTTRNLNMNE ELMGANLSLQ IDTSDLEDHR  180
ARRSVVLDDE VDLELRLGHG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010094264.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010094264.11e-150transcriptional regulator TAC1
TrEMBLW9QW151e-149W9QW15_9ROSA; Transcriptional regulator TAC1
STRINGXP_010094264.11e-150(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16863073
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.11e-15C2H2 family protein