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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010094860.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
|
| Family |
GRAS |
| Protein Properties |
Length: 498aa MW: 56717.7 Da PI: 6.4165 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010094860.1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 295.5 | 1.4e-90 | 93 | 495 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
l++lLl A+a+ ++d+ a + L++l + +s +gd++qR++ayf+ +Laarl+ s ++ + ++t+ +ee++a+ ++ vsP+++f+h
XP_010094860.1 93 LIHLLLITATAIGENDTVSALENLNELYKGVSLNGDSVQRVVAYFADGLAARLLTRKSPFFDMIMKEPTT----EEEFSAFIDLYRVSPYYQFAH 183
689****************************************************999999988888876....6788888889*********** PP
GRAS 96 ltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvl. 181
+taNqaI ea+e+e +++H++Dfdis+G+QWp+L+q+L++++ ++ slRiTg+g+ s eel+et++rL +f + + +++f+f+ l
XP_010094860.1 184 FTANQAIIEAFEKEeesnnRALHVVDFDISYGFQWPSLMQSLSEKAtgGNRISLRITGFGR----SPEELQETENRLVSFSKGFrNLSFDFQGLl 274
************9988887789***********************9744455*********....9****************9758*******96 PP
GRAS 182 .....vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
++ ++ + ++++ +++E++a nlv++l ++ +s+++e+Lklv+sl+P +v++veqe ++++ sFl rf+e+l+y++a+fdsl
XP_010094860.1 275 rssssGSTGSTNSNKQRIKKRNNETVAANLVFHLNTFE-----NNSKISETLKLVNSLNPSIVILVEQEDSRSARSFLSRFMESLHYFAAMFDSL 364
6542212223334666777777*************997.....33345679******************************************** PP
GRAS 272 eaklpreseerikvErellgreivnvvace.......gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee.... 354
+ lp es er ++E+ lg++i+ ++ g+e +he++e+W+er+e+ GF+ v++s+k + qaklll++ ++ +
XP_010094860.1 365 DDCLPLESAERLSIEKNHLGKQIKTMLNYDhdndhddGSENCPKHERFETWKERMEKHGFGGVRISSKSMIQAKLLLKMRThYYSPVLQFDgdns 459
***************************86511111115566779*********************************987622222333223344 PP
GRAS 355 ...............sgslv.lgWkdrpLvsvSaWr 374
+g ++ lgW++r L+++S+W+
XP_010094860.1 460 niniggggfkvferdEGRAIsLGWQNRYLLTASVWQ 495
555666666666666666667**************6 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 498 aa
Download sequence Send
to blast |
MEAMDDDQEK FLNLSLAIVA DSGGHDQRKR KRRRMDSLSP IAMSINNNSS YDHEACEGTI 60
FRLLQMREQM LKLDHHKKKM PTFEQGNNDG LHLIHLLLIT ATAIGENDTV SALENLNELY 120
KGVSLNGDSV QRVVAYFADG LAARLLTRKS PFFDMIMKEP TTEEEFSAFI DLYRVSPYYQ 180
FAHFTANQAI IEAFEKEEES NNRALHVVDF DISYGFQWPS LMQSLSEKAT GGNRISLRIT 240
GFGRSPEELQ ETENRLVSFS KGFRNLSFDF QGLLRSSSSG STGSTNSNKQ RIKKRNNETV 300
AANLVFHLNT FENNSKISET LKLVNSLNPS IVILVEQEDS RSARSFLSRF MESLHYFAAM 360
FDSLDDCLPL ESAERLSIEK NHLGKQIKTM LNYDHDNDHD DGSENCPKHE RFETWKERME 420
KHGFGGVRIS SKSMIQAKLL LKMRTHYYSP VLQFDGDNSN INIGGGGFKV FERDEGRAIS 480
LGWQNRYLLT ASVWQCSS
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 26 | 32 | QRKRKRR |
| 2 | 26 | 33 | QRKRKRRR |
| 3 | 27 | 32 | RKRKRR |
| 4 | 27 | 33 | RKRKRRR |
| 5 | 28 | 33 | KRKRRR |
| 6 | 29 | 33 | RKRRR |
