PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010095211.1
Common NameDREB5E
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 188aa    MW: 20454.1 Da    PI: 5.0179
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010095211.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63e-182170356
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    ykGVr +  +g+Wv+eIr+p+    +  r++lg+++ +e+Aa+a++aa  +++ge
  XP_010095211.1 21 YKGVRMRT-WGKWVSEIRVPK----SgERIWLGSYDAPEKAARAYDAAQYCIRGE 70
                    9****998.**********94....35*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.5E-302083IPR001471AP2/ERF domain
PROSITE profilePS5103220.9952077IPR001471AP2/ERF domain
PRINTSPR003671.2E-82132IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-272178IPR001471AP2/ERF domain
CDDcd000185.99E-282179No hitNo description
SuperFamilySSF541719.15E-202178IPR016177DNA-binding domain
PfamPF008471.1E-102170IPR001471AP2/ERF domain
PRINTSPR003671.2E-84359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MDLATTSIPK KVRRGRTFGP YKGVRMRTWG KWVSEIRVPK SGERIWLGSY DAPEKAARAY  60
DAAQYCIRGE RGSFNFPADK RPVLPQGSMV SLSKKDIQEI ATNFASFESN ISTSCSSLVS  120
SAMPQVPPDN NSAPPNMLVC SGMDGGAYES IGNSFASTSV IGATASSPES LELDDFLLLD  180
TEWIDELI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-171579974Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010095211.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783810.0KF678381.1 Morus notabilis dehydration responsive element binding transcription factor (DREB5E) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010095211.11e-137ethylene-responsive transcription factor ERF015
SwissprotQ6NLD52e-54ERF15_ARATH; Ethylene-responsive transcription factor ERF015
TrEMBLW6FFV41e-136W6FFV4_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010095211.11e-136(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF154791011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.15e-49ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]